Gene : Medtr4g128750 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10334:SF204 - ALLERGEN V5/TPX-1-RELATED FAMILY PROTEIN-RELATED Description:  CAP, cysteine-rich secretory protein, antigen 5
Genomic Order:  6871 Name:  ? Medtr4g128750
Secondary Identifier:  ? PAC:31109449
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g128750 0.5kb upstream 0.5kb upstream 1590 true chr4: 53588366-53589955 Medicago truncatula
Medtr4g128750 0.5kb upstream 0.5kb upstream 500 false chr4: 53588366-53588865 Medicago truncatula
Medtr4g128750 0.5kb downstream 0.5kb downstream 1590 true chr4: 53588866-53590455 Medicago truncatula
Medtr4g128750 0.5kb downstream 0.5kb downstream 500 false chr4: 53589956-53590455 Medicago truncatula
Medtr4g128750 1.0kb upstream 1.0kb upstream 2090 true chr4: 53587866-53589955 Medicago truncatula
Medtr4g128750 1.0kb upstream 1.0kb upstream 1000 false chr4: 53587866-53588865 Medicago truncatula
Medtr4g128750 1.0kb downstream 1.0kb downstream 2090 true chr4: 53588866-53590955 Medicago truncatula
Medtr4g128750 1.0kb downstream 1.0kb downstream 1000 false chr4: 53589956-53590955 Medicago truncatula
Medtr4g128750 2.0kb upstream 2.0kb upstream 3090 true chr4: 53586866-53589955 Medicago truncatula
Medtr4g128750 2.0kb upstream 2.0kb upstream 2000 false chr4: 53586866-53588865 Medicago truncatula
Medtr4g128750 2.0kb downstream 2.0kb downstream 3090 true chr4: 53588866-53591955 Medicago truncatula
Medtr4g128750 2.0kb downstream 2.0kb downstream 2000 false chr4: 53589956-53591955 Medicago truncatula
Medtr4g128750 5.0kb upstream 5.0kb upstream 6090 true chr4: 53583866-53589955 Medicago truncatula
Medtr4g128750 5.0kb upstream 5.0kb upstream 5000 false chr4: 53583866-53588865 Medicago truncatula
Medtr4g128750 5.0kb downstream 5.0kb downstream 6090 true chr4: 53588866-53594955 Medicago truncatula
Medtr4g128750 5.0kb downstream 5.0kb downstream 5000 false chr4: 53589956-53594955 Medicago truncatula
Medtr4g128750 10.0kb upstream 10.0kb upstream 11090 true chr4: 53578866-53589955 Medicago truncatula
Medtr4g128750 10.0kb upstream 10.0kb upstream 10000 false chr4: 53578866-53588865 Medicago truncatula
Medtr4g128750 10.0kb downstream 10.0kb downstream 11090 true chr4: 53588866-53599955 Medicago truncatula
Medtr4g128750 10.0kb downstream 10.0kb downstream 10000 false chr4: 53589956-53599955 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299944 5265 Fabidae View MSA
124071232 5270 Rosid View MSA
123751751 5271 Pentapetalae View MSA
122797168 5272 Eudicot View MSA
122051477 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121350274 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.502       Low
cufflinks 1.857        
cufflinks 1.97        
cufflinks 37.837     High High
cufflinks 3.491        
cufflinks 9.012        
cufflinks 12.41     High  
cufflinks 1.795        
cufflinks 36.537     High High

0 Strain