Gene : Medtr4g129200 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR33307:SF2 - BNR/ASP-BOX REPEAT FAMILY PROTEIN Description:  alpha-rhamnosidase-like protein
Genomic Order:  6901 Name:  ? Medtr4g129200
Secondary Identifier:  ? PAC:31110095
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g129200 0.5kb upstream 0.5kb upstream 3634 true chr4: 53791179-53794812 Medicago truncatula
Medtr4g129200 0.5kb upstream 0.5kb upstream 500 false chr4: 53791179-53791678 Medicago truncatula
Medtr4g129200 0.5kb downstream 0.5kb downstream 3634 true chr4: 53791679-53795312 Medicago truncatula
Medtr4g129200 0.5kb downstream 0.5kb downstream 500 false chr4: 53794813-53795312 Medicago truncatula
Medtr4g129200 1.0kb upstream 1.0kb upstream 4134 true chr4: 53790679-53794812 Medicago truncatula
Medtr4g129200 1.0kb upstream 1.0kb upstream 1000 false chr4: 53790679-53791678 Medicago truncatula
Medtr4g129200 1.0kb downstream 1.0kb downstream 4134 true chr4: 53791679-53795812 Medicago truncatula
Medtr4g129200 1.0kb downstream 1.0kb downstream 1000 false chr4: 53794813-53795812 Medicago truncatula
Medtr4g129200 2.0kb upstream 2.0kb upstream 5134 true chr4: 53789679-53794812 Medicago truncatula
Medtr4g129200 2.0kb upstream 2.0kb upstream 2000 false chr4: 53789679-53791678 Medicago truncatula
Medtr4g129200 2.0kb downstream 2.0kb downstream 5134 true chr4: 53791679-53796812 Medicago truncatula
Medtr4g129200 2.0kb downstream 2.0kb downstream 2000 false chr4: 53794813-53796812 Medicago truncatula
Medtr4g129200 5.0kb upstream 5.0kb upstream 8134 true chr4: 53786679-53794812 Medicago truncatula
Medtr4g129200 5.0kb upstream 5.0kb upstream 5000 false chr4: 53786679-53791678 Medicago truncatula
Medtr4g129200 5.0kb downstream 5.0kb downstream 8134 true chr4: 53791679-53799812 Medicago truncatula
Medtr4g129200 5.0kb downstream 5.0kb downstream 5000 false chr4: 53794813-53799812 Medicago truncatula
Medtr4g129200 10.0kb upstream 10.0kb upstream 13134 true chr4: 53781679-53794812 Medicago truncatula
Medtr4g129200 10.0kb upstream 10.0kb upstream 10000 false chr4: 53781679-53791678 Medicago truncatula
Medtr4g129200 10.0kb downstream 10.0kb downstream 13134 true chr4: 53791679-53804812 Medicago truncatula
Medtr4g129200 10.0kb downstream 10.0kb downstream 10000 false chr4: 53794813-53804812 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297380 5265 Fabidae View MSA
124050154 5270 Rosid View MSA
123741218 5271 Pentapetalae View MSA
122786706 5272 Eudicot View MSA
122044355 5273 Angiosperm View MSA
121343996 5274 Embryophyte View MSA
123425973 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.376        
cufflinks 0.393        
cufflinks 0.512        
cufflinks 0.275        
cufflinks 0.778       High
cufflinks 0.035     Low Low
cufflinks 0.168        
cufflinks 0.494        
cufflinks 0.228        

0 Strain