Gene : Medtr4g130270 M. truncatula Mt4.0v1
Defline:  (1 of 209) PF00847 - AP2 domain (AP2) Description:  AP2-like ethylene-responsive transcription factor
Genomic Order:  6959 Name:  ? Medtr4g130270
Secondary Identifier:  ? PAC:31106944
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g130270 0.5kb upstream 0.5kb upstream 3201 true chr4: 54265943-54269143 Medicago truncatula
Medtr4g130270 0.5kb upstream 0.5kb upstream 500 false chr4: 54265943-54266442 Medicago truncatula
Medtr4g130270 0.5kb downstream 0.5kb downstream 3201 true chr4: 54266443-54269643 Medicago truncatula
Medtr4g130270 0.5kb downstream 0.5kb downstream 500 false chr4: 54269144-54269643 Medicago truncatula
Medtr4g130270 1.0kb upstream 1.0kb upstream 3701 true chr4: 54265443-54269143 Medicago truncatula
Medtr4g130270 1.0kb upstream 1.0kb upstream 1000 false chr4: 54265443-54266442 Medicago truncatula
Medtr4g130270 1.0kb downstream 1.0kb downstream 3701 true chr4: 54266443-54270143 Medicago truncatula
Medtr4g130270 1.0kb downstream 1.0kb downstream 1000 false chr4: 54269144-54270143 Medicago truncatula
Medtr4g130270 2.0kb upstream 2.0kb upstream 4701 true chr4: 54264443-54269143 Medicago truncatula
Medtr4g130270 2.0kb upstream 2.0kb upstream 2000 false chr4: 54264443-54266442 Medicago truncatula
Medtr4g130270 2.0kb downstream 2.0kb downstream 4701 true chr4: 54266443-54271143 Medicago truncatula
Medtr4g130270 2.0kb downstream 2.0kb downstream 2000 false chr4: 54269144-54271143 Medicago truncatula
Medtr4g130270 5.0kb upstream 5.0kb upstream 7701 true chr4: 54261443-54269143 Medicago truncatula
Medtr4g130270 5.0kb upstream 5.0kb upstream 5000 false chr4: 54261443-54266442 Medicago truncatula
Medtr4g130270 5.0kb downstream 5.0kb downstream 7701 true chr4: 54266443-54274143 Medicago truncatula
Medtr4g130270 5.0kb downstream 5.0kb downstream 5000 false chr4: 54269144-54274143 Medicago truncatula
Medtr4g130270 10.0kb upstream 10.0kb upstream 12701 true chr4: 54256443-54269143 Medicago truncatula
Medtr4g130270 10.0kb upstream 10.0kb upstream 10000 false chr4: 54256443-54266442 Medicago truncatula
Medtr4g130270 10.0kb downstream 10.0kb downstream 12701 true chr4: 54266443-54279143 Medicago truncatula
Medtr4g130270 10.0kb downstream 10.0kb downstream 10000 false chr4: 54269144-54279143 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311262 5265 Fabidae View MSA
124061402 5270 Rosid View MSA
123744110 5271 Pentapetalae View MSA
122797615 5272 Eudicot View MSA
122048142 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121350345 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.11        
cufflinks 0.086        
cufflinks 0.037     Low Low
cufflinks 0.359       High
cufflinks 0.096        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.461       High
cufflinks 0.079        
cufflinks 0.027     Low Low

0 Strain