Gene : Medtr4g130180 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13505:SF7 - TRANSMEMBRANE PROTEIN 208 Description:  transmembrane protein
Genomic Order:  6951 Name:  ? Medtr4g130180
Secondary Identifier:  ? PAC:31112574
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g130180 0.5kb upstream 0.5kb upstream 4589 true chr4: 54202872-54207460 Medicago truncatula
Medtr4g130180 0.5kb upstream 0.5kb upstream 500 false chr4: 54202872-54203371 Medicago truncatula
Medtr4g130180 0.5kb downstream 0.5kb downstream 4589 true chr4: 54203372-54207960 Medicago truncatula
Medtr4g130180 0.5kb downstream 0.5kb downstream 500 false chr4: 54207461-54207960 Medicago truncatula
Medtr4g130180 1.0kb upstream 1.0kb upstream 5089 true chr4: 54202372-54207460 Medicago truncatula
Medtr4g130180 1.0kb upstream 1.0kb upstream 1000 false chr4: 54202372-54203371 Medicago truncatula
Medtr4g130180 1.0kb downstream 1.0kb downstream 5089 true chr4: 54203372-54208460 Medicago truncatula
Medtr4g130180 1.0kb downstream 1.0kb downstream 1000 false chr4: 54207461-54208460 Medicago truncatula
Medtr4g130180 2.0kb upstream 2.0kb upstream 6089 true chr4: 54201372-54207460 Medicago truncatula
Medtr4g130180 2.0kb upstream 2.0kb upstream 2000 false chr4: 54201372-54203371 Medicago truncatula
Medtr4g130180 2.0kb downstream 2.0kb downstream 6089 true chr4: 54203372-54209460 Medicago truncatula
Medtr4g130180 2.0kb downstream 2.0kb downstream 2000 false chr4: 54207461-54209460 Medicago truncatula
Medtr4g130180 5.0kb upstream 5.0kb upstream 9089 true chr4: 54198372-54207460 Medicago truncatula
Medtr4g130180 5.0kb upstream 5.0kb upstream 5000 false chr4: 54198372-54203371 Medicago truncatula
Medtr4g130180 5.0kb downstream 5.0kb downstream 9089 true chr4: 54203372-54212460 Medicago truncatula
Medtr4g130180 5.0kb downstream 5.0kb downstream 5000 false chr4: 54207461-54212460 Medicago truncatula
Medtr4g130180 10.0kb upstream 10.0kb upstream 14089 true chr4: 54193372-54207460 Medicago truncatula
Medtr4g130180 10.0kb upstream 10.0kb upstream 10000 false chr4: 54193372-54203371 Medicago truncatula
Medtr4g130180 10.0kb downstream 10.0kb downstream 14089 true chr4: 54203372-54217460 Medicago truncatula
Medtr4g130180 10.0kb downstream 10.0kb downstream 10000 false chr4: 54207461-54217460 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308891 5265 Fabidae View MSA
124065842 5270 Rosid View MSA
123736795 5271 Pentapetalae View MSA
122789495 5272 Eudicot View MSA
122042916 5273 Angiosperm View MSA
121345571 5274 Embryophyte View MSA
123425325 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.836        
cufflinks 6.384        
cufflinks 8.538        
cufflinks 9.234     High  
cufflinks 7.824        
cufflinks 4.166       Low
cufflinks 10.823     High High
cufflinks 7.197        
cufflinks 10.888     High High

0 Strain