Gene : Medtr4g130530 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10938 - TRANSLATION INITIATION FACTOR IF-3 Description:  translation initiation factor IF-3
Genomic Order:  6977 Name:  ? Medtr4g130530
Secondary Identifier:  ? PAC:31108442
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g130530 0.5kb upstream 0.5kb upstream 4847 true chr4: 54389216-54394062 Medicago truncatula
Medtr4g130530 0.5kb upstream 0.5kb upstream 500 false chr4: 54393563-54394062 Medicago truncatula
Medtr4g130530 0.5kb downstream 0.5kb downstream 4847 true chr4: 54388716-54393562 Medicago truncatula
Medtr4g130530 0.5kb downstream 0.5kb downstream 500 false chr4: 54388716-54389215 Medicago truncatula
Medtr4g130530 1.0kb upstream 1.0kb upstream 5347 true chr4: 54389216-54394562 Medicago truncatula
Medtr4g130530 1.0kb upstream 1.0kb upstream 1000 false chr4: 54393563-54394562 Medicago truncatula
Medtr4g130530 1.0kb downstream 1.0kb downstream 5347 true chr4: 54388216-54393562 Medicago truncatula
Medtr4g130530 1.0kb downstream 1.0kb downstream 1000 false chr4: 54388216-54389215 Medicago truncatula
Medtr4g130530 2.0kb upstream 2.0kb upstream 6347 true chr4: 54389216-54395562 Medicago truncatula
Medtr4g130530 2.0kb upstream 2.0kb upstream 2000 false chr4: 54393563-54395562 Medicago truncatula
Medtr4g130530 2.0kb downstream 2.0kb downstream 6347 true chr4: 54387216-54393562 Medicago truncatula
Medtr4g130530 2.0kb downstream 2.0kb downstream 2000 false chr4: 54387216-54389215 Medicago truncatula
Medtr4g130530 5.0kb upstream 5.0kb upstream 9347 true chr4: 54389216-54398562 Medicago truncatula
Medtr4g130530 5.0kb upstream 5.0kb upstream 5000 false chr4: 54393563-54398562 Medicago truncatula
Medtr4g130530 5.0kb downstream 5.0kb downstream 9347 true chr4: 54384216-54393562 Medicago truncatula
Medtr4g130530 5.0kb downstream 5.0kb downstream 5000 false chr4: 54384216-54389215 Medicago truncatula
Medtr4g130530 10.0kb upstream 10.0kb upstream 14347 true chr4: 54389216-54403562 Medicago truncatula
Medtr4g130530 10.0kb upstream 10.0kb upstream 10000 false chr4: 54393563-54403562 Medicago truncatula
Medtr4g130530 10.0kb downstream 10.0kb downstream 14347 true chr4: 54379216-54393562 Medicago truncatula
Medtr4g130530 10.0kb downstream 10.0kb downstream 10000 false chr4: 54379216-54389215 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302671 5265 Fabidae View MSA
124068567 5270 Rosid View MSA
123738585 5271 Pentapetalae View MSA
122786814 5272 Eudicot View MSA
122047018 5273 Angiosperm View MSA
121346506 5274 Embryophyte View MSA
123426932 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.378        
cufflinks 5.233        
cufflinks 5.455        
cufflinks 0.235        
cufflinks 7.847       High
cufflinks 0.011     Low Low
cufflinks 0.167        
cufflinks 5.896        
cufflinks 0.135        

0 Strain