Gene : Medtr4g130690 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR23067//PTHR23067:SF43 - DOUBLE-STRANDED RNA-BINDING ZINC FINGER PROTEIN Description:  C2H2 type zf-met: zinc-finger protein
Genomic Order:  6992 Name:  ? Medtr4g130690
Secondary Identifier:  ? PAC:31111280
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g130690 0.5kb upstream 0.5kb upstream 4649 true chr4: 54455852-54460500 Medicago truncatula
Medtr4g130690 0.5kb upstream 0.5kb upstream 500 false chr4: 54455852-54456351 Medicago truncatula
Medtr4g130690 0.5kb downstream 0.5kb downstream 4649 true chr4: 54456352-54461000 Medicago truncatula
Medtr4g130690 0.5kb downstream 0.5kb downstream 500 false chr4: 54460501-54461000 Medicago truncatula
Medtr4g130690 1.0kb upstream 1.0kb upstream 5149 true chr4: 54455352-54460500 Medicago truncatula
Medtr4g130690 1.0kb upstream 1.0kb upstream 1000 false chr4: 54455352-54456351 Medicago truncatula
Medtr4g130690 1.0kb downstream 1.0kb downstream 5149 true chr4: 54456352-54461500 Medicago truncatula
Medtr4g130690 1.0kb downstream 1.0kb downstream 1000 false chr4: 54460501-54461500 Medicago truncatula
Medtr4g130690 2.0kb upstream 2.0kb upstream 6149 true chr4: 54454352-54460500 Medicago truncatula
Medtr4g130690 2.0kb upstream 2.0kb upstream 2000 false chr4: 54454352-54456351 Medicago truncatula
Medtr4g130690 2.0kb downstream 2.0kb downstream 6149 true chr4: 54456352-54462500 Medicago truncatula
Medtr4g130690 2.0kb downstream 2.0kb downstream 2000 false chr4: 54460501-54462500 Medicago truncatula
Medtr4g130690 5.0kb upstream 5.0kb upstream 9149 true chr4: 54451352-54460500 Medicago truncatula
Medtr4g130690 5.0kb upstream 5.0kb upstream 5000 false chr4: 54451352-54456351 Medicago truncatula
Medtr4g130690 5.0kb downstream 5.0kb downstream 9149 true chr4: 54456352-54465500 Medicago truncatula
Medtr4g130690 5.0kb downstream 5.0kb downstream 5000 false chr4: 54460501-54465500 Medicago truncatula
Medtr4g130690 10.0kb upstream 10.0kb upstream 14149 true chr4: 54446352-54460500 Medicago truncatula
Medtr4g130690 10.0kb upstream 10.0kb upstream 10000 false chr4: 54446352-54456351 Medicago truncatula
Medtr4g130690 10.0kb downstream 10.0kb downstream 14149 true chr4: 54456352-54470500 Medicago truncatula
Medtr4g130690 10.0kb downstream 10.0kb downstream 10000 false chr4: 54460501-54470500 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312252 5265 Fabidae View MSA
124071021 5270 Rosid View MSA
123744218 5271 Pentapetalae View MSA
122791128 5272 Eudicot View MSA
122050358 5273 Angiosperm View MSA
121349779 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.008     Low  
cufflinks 0.026     Low  
cufflinks 0.006     Low Low
cufflinks 0.006     Low Low
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.031     Low High
cufflinks 0.0     Not Expressed Not Expressed

0 Strain