Gene : Medtr4g116200 M. truncatula Mt4.0v1
Description:  SAM domain protein Genomic Order:  6112
Name:  ? Medtr4g116200 Secondary Identifier:  ? PAC:31111640
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g116200 0.5kb upstream 0.5kb upstream 1289 true chr4: 48069210-48070498 Medicago truncatula
Medtr4g116200 0.5kb upstream 0.5kb upstream 500 false chr4: 48069210-48069709 Medicago truncatula
Medtr4g116200 0.5kb downstream 0.5kb downstream 1289 true chr4: 48069710-48070998 Medicago truncatula
Medtr4g116200 0.5kb downstream 0.5kb downstream 500 false chr4: 48070499-48070998 Medicago truncatula
Medtr4g116200 1.0kb upstream 1.0kb upstream 1789 true chr4: 48068710-48070498 Medicago truncatula
Medtr4g116200 1.0kb upstream 1.0kb upstream 1000 false chr4: 48068710-48069709 Medicago truncatula
Medtr4g116200 1.0kb downstream 1.0kb downstream 1789 true chr4: 48069710-48071498 Medicago truncatula
Medtr4g116200 1.0kb downstream 1.0kb downstream 1000 false chr4: 48070499-48071498 Medicago truncatula
Medtr4g116200 2.0kb upstream 2.0kb upstream 2789 true chr4: 48067710-48070498 Medicago truncatula
Medtr4g116200 2.0kb upstream 2.0kb upstream 2000 false chr4: 48067710-48069709 Medicago truncatula
Medtr4g116200 2.0kb downstream 2.0kb downstream 2789 true chr4: 48069710-48072498 Medicago truncatula
Medtr4g116200 2.0kb downstream 2.0kb downstream 2000 false chr4: 48070499-48072498 Medicago truncatula
Medtr4g116200 5.0kb upstream 5.0kb upstream 5789 true chr4: 48064710-48070498 Medicago truncatula
Medtr4g116200 5.0kb upstream 5.0kb upstream 5000 false chr4: 48064710-48069709 Medicago truncatula
Medtr4g116200 5.0kb downstream 5.0kb downstream 5789 true chr4: 48069710-48075498 Medicago truncatula
Medtr4g116200 5.0kb downstream 5.0kb downstream 5000 false chr4: 48070499-48075498 Medicago truncatula
Medtr4g116200 10.0kb upstream 10.0kb upstream 10789 true chr4: 48059710-48070498 Medicago truncatula
Medtr4g116200 10.0kb upstream 10.0kb upstream 10000 false chr4: 48059710-48069709 Medicago truncatula
Medtr4g116200 10.0kb downstream 10.0kb downstream 10789 true chr4: 48069710-48080498 Medicago truncatula
Medtr4g116200 10.0kb downstream 10.0kb downstream 10000 false chr4: 48070499-48080498 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027774 5273 Angiosperm View MSA
122311982 5265 Fabidae View MSA
124063450 5270 Rosid View MSA
123745602 5271 Pentapetalae View MSA
122771566 5272 Eudicot View MSA
121297384 5274 Embryophyte View MSA
123335447 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.096       Low
cufflinks 7.297        
cufflinks 3.053        
cufflinks 0.267        
cufflinks 7.596        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.329        
cufflinks 6.215        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain