Gene : Medtr4g116300 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31065:SF11 - PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN Description:  PLATZ transcription factor family protein
Genomic Order:  6120 Name:  ? Medtr4g116300
Secondary Identifier:  ? PAC:31113677
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g116300 0.5kb upstream 0.5kb upstream 1978 true chr4: 48132366-48134343 Medicago truncatula
Medtr4g116300 0.5kb upstream 0.5kb upstream 500 false chr4: 48133844-48134343 Medicago truncatula
Medtr4g116300 0.5kb downstream 0.5kb downstream 1978 true chr4: 48131866-48133843 Medicago truncatula
Medtr4g116300 0.5kb downstream 0.5kb downstream 500 false chr4: 48131866-48132365 Medicago truncatula
Medtr4g116300 1.0kb upstream 1.0kb upstream 2478 true chr4: 48132366-48134843 Medicago truncatula
Medtr4g116300 1.0kb upstream 1.0kb upstream 1000 false chr4: 48133844-48134843 Medicago truncatula
Medtr4g116300 1.0kb downstream 1.0kb downstream 2478 true chr4: 48131366-48133843 Medicago truncatula
Medtr4g116300 1.0kb downstream 1.0kb downstream 1000 false chr4: 48131366-48132365 Medicago truncatula
Medtr4g116300 2.0kb upstream 2.0kb upstream 3478 true chr4: 48132366-48135843 Medicago truncatula
Medtr4g116300 2.0kb upstream 2.0kb upstream 2000 false chr4: 48133844-48135843 Medicago truncatula
Medtr4g116300 2.0kb downstream 2.0kb downstream 3478 true chr4: 48130366-48133843 Medicago truncatula
Medtr4g116300 2.0kb downstream 2.0kb downstream 2000 false chr4: 48130366-48132365 Medicago truncatula
Medtr4g116300 5.0kb upstream 5.0kb upstream 6478 true chr4: 48132366-48138843 Medicago truncatula
Medtr4g116300 5.0kb upstream 5.0kb upstream 5000 false chr4: 48133844-48138843 Medicago truncatula
Medtr4g116300 5.0kb downstream 5.0kb downstream 6478 true chr4: 48127366-48133843 Medicago truncatula
Medtr4g116300 5.0kb downstream 5.0kb downstream 5000 false chr4: 48127366-48132365 Medicago truncatula
Medtr4g116300 10.0kb upstream 10.0kb upstream 11478 true chr4: 48132366-48143843 Medicago truncatula
Medtr4g116300 10.0kb upstream 10.0kb upstream 10000 false chr4: 48133844-48143843 Medicago truncatula
Medtr4g116300 10.0kb downstream 10.0kb downstream 11478 true chr4: 48122366-48133843 Medicago truncatula
Medtr4g116300 10.0kb downstream 10.0kb downstream 10000 false chr4: 48122366-48132365 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312691 5265 Fabidae View MSA
124068522 5270 Rosid View MSA
123747069 5271 Pentapetalae View MSA
122791391 5272 Eudicot View MSA
122044768 5273 Angiosperm View MSA
121349888 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.383       High
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.079        
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.065        
cufflinks 0.011     Low Low
cufflinks 1.221        

0 Strain