Gene : Medtr4g116190 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR12294 - EF HAND DOMAIN FAMILY A1,A2-RELATED Description:  calcium-binding EF hand protein
Genomic Order:  6111 Name:  ? Medtr4g116190
Secondary Identifier:  ? PAC:31109306
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g116190 0.5kb upstream 0.5kb upstream 3146 true chr4: 48063074-48066219 Medicago truncatula
Medtr4g116190 0.5kb upstream 0.5kb upstream 500 false chr4: 48065720-48066219 Medicago truncatula
Medtr4g116190 0.5kb downstream 0.5kb downstream 3146 true chr4: 48062574-48065719 Medicago truncatula
Medtr4g116190 0.5kb downstream 0.5kb downstream 500 false chr4: 48062574-48063073 Medicago truncatula
Medtr4g116190 1.0kb upstream 1.0kb upstream 3646 true chr4: 48063074-48066719 Medicago truncatula
Medtr4g116190 1.0kb upstream 1.0kb upstream 1000 false chr4: 48065720-48066719 Medicago truncatula
Medtr4g116190 1.0kb downstream 1.0kb downstream 3646 true chr4: 48062074-48065719 Medicago truncatula
Medtr4g116190 1.0kb downstream 1.0kb downstream 1000 false chr4: 48062074-48063073 Medicago truncatula
Medtr4g116190 2.0kb upstream 2.0kb upstream 4646 true chr4: 48063074-48067719 Medicago truncatula
Medtr4g116190 2.0kb upstream 2.0kb upstream 2000 false chr4: 48065720-48067719 Medicago truncatula
Medtr4g116190 2.0kb downstream 2.0kb downstream 4646 true chr4: 48061074-48065719 Medicago truncatula
Medtr4g116190 2.0kb downstream 2.0kb downstream 2000 false chr4: 48061074-48063073 Medicago truncatula
Medtr4g116190 5.0kb upstream 5.0kb upstream 7646 true chr4: 48063074-48070719 Medicago truncatula
Medtr4g116190 5.0kb upstream 5.0kb upstream 5000 false chr4: 48065720-48070719 Medicago truncatula
Medtr4g116190 5.0kb downstream 5.0kb downstream 7646 true chr4: 48058074-48065719 Medicago truncatula
Medtr4g116190 5.0kb downstream 5.0kb downstream 5000 false chr4: 48058074-48063073 Medicago truncatula
Medtr4g116190 10.0kb upstream 10.0kb upstream 12646 true chr4: 48063074-48075719 Medicago truncatula
Medtr4g116190 10.0kb upstream 10.0kb upstream 10000 false chr4: 48065720-48075719 Medicago truncatula
Medtr4g116190 10.0kb downstream 10.0kb downstream 12646 true chr4: 48053074-48065719 Medicago truncatula
Medtr4g116190 10.0kb downstream 10.0kb downstream 10000 false chr4: 48053074-48063073 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302172 5265 Fabidae View MSA
124073183 5270 Rosid View MSA
123742641 5271 Pentapetalae View MSA
122790177 5272 Eudicot View MSA
122041646 5273 Angiosperm View MSA
121347886 5274 Embryophyte View MSA
123424828 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.022     Low Low
cufflinks 1.523        
cufflinks 1.285        
cufflinks 0.009     Low Low
cufflinks 2.168        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.177        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain