Gene : Medtr4g116900 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR14773:SF0 - WD REPEAT-CONTAINING PROTEIN 76 Description:  transducin/WD-like repeat-protein
Genomic Order:  6157 Name:  ? Medtr4g116900
Secondary Identifier:  ? PAC:31106832
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g116900 0.5kb upstream 0.5kb upstream 3060 true chr4: 48410145-48413204 Medicago truncatula
Medtr4g116900 0.5kb upstream 0.5kb upstream 500 false chr4: 48412705-48413204 Medicago truncatula
Medtr4g116900 0.5kb downstream 0.5kb downstream 3060 true chr4: 48409645-48412704 Medicago truncatula
Medtr4g116900 0.5kb downstream 0.5kb downstream 500 false chr4: 48409645-48410144 Medicago truncatula
Medtr4g116900 1.0kb upstream 1.0kb upstream 3560 true chr4: 48410145-48413704 Medicago truncatula
Medtr4g116900 1.0kb upstream 1.0kb upstream 1000 false chr4: 48412705-48413704 Medicago truncatula
Medtr4g116900 1.0kb downstream 1.0kb downstream 3560 true chr4: 48409145-48412704 Medicago truncatula
Medtr4g116900 1.0kb downstream 1.0kb downstream 1000 false chr4: 48409145-48410144 Medicago truncatula
Medtr4g116900 2.0kb upstream 2.0kb upstream 4560 true chr4: 48410145-48414704 Medicago truncatula
Medtr4g116900 2.0kb upstream 2.0kb upstream 2000 false chr4: 48412705-48414704 Medicago truncatula
Medtr4g116900 2.0kb downstream 2.0kb downstream 4560 true chr4: 48408145-48412704 Medicago truncatula
Medtr4g116900 2.0kb downstream 2.0kb downstream 2000 false chr4: 48408145-48410144 Medicago truncatula
Medtr4g116900 5.0kb upstream 5.0kb upstream 7560 true chr4: 48410145-48417704 Medicago truncatula
Medtr4g116900 5.0kb upstream 5.0kb upstream 5000 false chr4: 48412705-48417704 Medicago truncatula
Medtr4g116900 5.0kb downstream 5.0kb downstream 7560 true chr4: 48405145-48412704 Medicago truncatula
Medtr4g116900 5.0kb downstream 5.0kb downstream 5000 false chr4: 48405145-48410144 Medicago truncatula
Medtr4g116900 10.0kb upstream 10.0kb upstream 12560 true chr4: 48410145-48422704 Medicago truncatula
Medtr4g116900 10.0kb upstream 10.0kb upstream 10000 false chr4: 48412705-48422704 Medicago truncatula
Medtr4g116900 10.0kb downstream 10.0kb downstream 12560 true chr4: 48400145-48412704 Medicago truncatula
Medtr4g116900 10.0kb downstream 10.0kb downstream 10000 false chr4: 48400145-48410144 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311869 5265 Fabidae View MSA
124061440 5270 Rosid View MSA
123742237 5271 Pentapetalae View MSA
122797520 5272 Eudicot View MSA
122047560 5273 Angiosperm View MSA
121310760 5274 Embryophyte View MSA
123425602 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.47        
cufflinks 0.076        
cufflinks 0.023     Low Low
cufflinks 0.891        
cufflinks 0.063     Low  
cufflinks 0.416        
cufflinks 0.695        
cufflinks 0.063        
cufflinks 1.382       High

0 Strain