Gene : Medtr4g116870 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11630:SF42 - DNA REPLICATION LICENSING FACTOR MCM5 Description:  DNA replication licensing factor MCM4
Genomic Order:  6154 Name:  ? Medtr4g116870
Secondary Identifier:  ? PAC:31113586
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g116870 0.5kb upstream 0.5kb upstream 6569 true chr4: 48391992-48398560 Medicago truncatula
Medtr4g116870 0.5kb upstream 0.5kb upstream 500 false chr4: 48391992-48392491 Medicago truncatula
Medtr4g116870 0.5kb downstream 0.5kb downstream 6569 true chr4: 48392492-48399060 Medicago truncatula
Medtr4g116870 0.5kb downstream 0.5kb downstream 500 false chr4: 48398561-48399060 Medicago truncatula
Medtr4g116870 1.0kb upstream 1.0kb upstream 7069 true chr4: 48391492-48398560 Medicago truncatula
Medtr4g116870 1.0kb upstream 1.0kb upstream 1000 false chr4: 48391492-48392491 Medicago truncatula
Medtr4g116870 1.0kb downstream 1.0kb downstream 7069 true chr4: 48392492-48399560 Medicago truncatula
Medtr4g116870 1.0kb downstream 1.0kb downstream 1000 false chr4: 48398561-48399560 Medicago truncatula
Medtr4g116870 2.0kb upstream 2.0kb upstream 8069 true chr4: 48390492-48398560 Medicago truncatula
Medtr4g116870 2.0kb upstream 2.0kb upstream 2000 false chr4: 48390492-48392491 Medicago truncatula
Medtr4g116870 2.0kb downstream 2.0kb downstream 8069 true chr4: 48392492-48400560 Medicago truncatula
Medtr4g116870 2.0kb downstream 2.0kb downstream 2000 false chr4: 48398561-48400560 Medicago truncatula
Medtr4g116870 5.0kb upstream 5.0kb upstream 11069 true chr4: 48387492-48398560 Medicago truncatula
Medtr4g116870 5.0kb upstream 5.0kb upstream 5000 false chr4: 48387492-48392491 Medicago truncatula
Medtr4g116870 5.0kb downstream 5.0kb downstream 11069 true chr4: 48392492-48403560 Medicago truncatula
Medtr4g116870 5.0kb downstream 5.0kb downstream 5000 false chr4: 48398561-48403560 Medicago truncatula
Medtr4g116870 10.0kb upstream 10.0kb upstream 16069 true chr4: 48382492-48398560 Medicago truncatula
Medtr4g116870 10.0kb upstream 10.0kb upstream 10000 false chr4: 48382492-48392491 Medicago truncatula
Medtr4g116870 10.0kb downstream 10.0kb downstream 16069 true chr4: 48392492-48408560 Medicago truncatula
Medtr4g116870 10.0kb downstream 10.0kb downstream 10000 false chr4: 48398561-48408560 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304817 5265 Fabidae View MSA
124068340 5270 Rosid View MSA
123739009 5271 Pentapetalae View MSA
122789464 5272 Eudicot View MSA
122046085 5273 Angiosperm View MSA
123428876 5275 Viridiplantae View MSA
121346646 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.236        
cufflinks 0.095        
cufflinks 0.047     Low  
cufflinks 0.336        
cufflinks 0.069        
cufflinks 0.048     Low  
cufflinks 0.833       High
cufflinks 0.041     Low Low
cufflinks 1.481       High

0 Strain