Gene : Medtr4g116840 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12136//PTHR12136:SF49 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR Description:  pleckstrin-like (PH) and lipid-binding START domain protein
Genomic Order:  6152 Name:  ? Medtr4g116840
Secondary Identifier:  ? PAC:31114911
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g116840 0.5kb upstream 0.5kb upstream 16253 true chr4: 48352577-48368829 Medicago truncatula
Medtr4g116840 0.5kb upstream 0.5kb upstream 500 false chr4: 48352577-48353076 Medicago truncatula
Medtr4g116840 0.5kb downstream 0.5kb downstream 16253 true chr4: 48353077-48369329 Medicago truncatula
Medtr4g116840 0.5kb downstream 0.5kb downstream 500 false chr4: 48368830-48369329 Medicago truncatula
Medtr4g116840 1.0kb upstream 1.0kb upstream 16753 true chr4: 48352077-48368829 Medicago truncatula
Medtr4g116840 1.0kb upstream 1.0kb upstream 1000 false chr4: 48352077-48353076 Medicago truncatula
Medtr4g116840 1.0kb downstream 1.0kb downstream 16753 true chr4: 48353077-48369829 Medicago truncatula
Medtr4g116840 1.0kb downstream 1.0kb downstream 1000 false chr4: 48368830-48369829 Medicago truncatula
Medtr4g116840 2.0kb upstream 2.0kb upstream 17753 true chr4: 48351077-48368829 Medicago truncatula
Medtr4g116840 2.0kb upstream 2.0kb upstream 2000 false chr4: 48351077-48353076 Medicago truncatula
Medtr4g116840 2.0kb downstream 2.0kb downstream 17753 true chr4: 48353077-48370829 Medicago truncatula
Medtr4g116840 2.0kb downstream 2.0kb downstream 2000 false chr4: 48368830-48370829 Medicago truncatula
Medtr4g116840 5.0kb upstream 5.0kb upstream 20753 true chr4: 48348077-48368829 Medicago truncatula
Medtr4g116840 5.0kb upstream 5.0kb upstream 5000 false chr4: 48348077-48353076 Medicago truncatula
Medtr4g116840 5.0kb downstream 5.0kb downstream 20753 true chr4: 48353077-48373829 Medicago truncatula
Medtr4g116840 5.0kb downstream 5.0kb downstream 5000 false chr4: 48368830-48373829 Medicago truncatula
Medtr4g116840 10.0kb upstream 10.0kb upstream 25753 true chr4: 48343077-48368829 Medicago truncatula
Medtr4g116840 10.0kb upstream 10.0kb upstream 10000 false chr4: 48343077-48353076 Medicago truncatula
Medtr4g116840 10.0kb downstream 10.0kb downstream 25753 true chr4: 48353077-48378829 Medicago truncatula
Medtr4g116840 10.0kb downstream 10.0kb downstream 10000 false chr4: 48368830-48378829 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309252 5265 Fabidae View MSA
124075658 5270 Rosid View MSA
123742206 5271 Pentapetalae View MSA
122790410 5272 Eudicot View MSA
122042175 5273 Angiosperm View MSA
121350170 5274 Embryophyte View MSA
123428121 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.038        
cufflinks 1.71        
cufflinks 1.446        
cufflinks 0.529       Low
cufflinks 1.327        
cufflinks 0.944        
cufflinks 2.01        
cufflinks 1.335        
cufflinks 2.282       High

0 Strain