Gene : Medtr4g117990 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31307:SF3 - ALCOHOL DEHYDROGENASE TRANSCRIPTION FACTOR MYB/SANT-LIKE PROTEIN Description:  transcription factor
Genomic Order:  6235 Name:  ? Medtr4g117990
Secondary Identifier:  ? PAC:31110782
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g117990 0.5kb upstream 0.5kb upstream 1746 true chr4: 48968971-48970716 Medicago truncatula
Medtr4g117990 0.5kb upstream 0.5kb upstream 500 false chr4: 48968971-48969470 Medicago truncatula
Medtr4g117990 0.5kb downstream 0.5kb downstream 1746 true chr4: 48969471-48971216 Medicago truncatula
Medtr4g117990 0.5kb downstream 0.5kb downstream 500 false chr4: 48970717-48971216 Medicago truncatula
Medtr4g117990 1.0kb upstream 1.0kb upstream 2246 true chr4: 48968471-48970716 Medicago truncatula
Medtr4g117990 1.0kb upstream 1.0kb upstream 1000 false chr4: 48968471-48969470 Medicago truncatula
Medtr4g117990 1.0kb downstream 1.0kb downstream 2246 true chr4: 48969471-48971716 Medicago truncatula
Medtr4g117990 1.0kb downstream 1.0kb downstream 1000 false chr4: 48970717-48971716 Medicago truncatula
Medtr4g117990 2.0kb upstream 2.0kb upstream 3246 true chr4: 48967471-48970716 Medicago truncatula
Medtr4g117990 2.0kb upstream 2.0kb upstream 2000 false chr4: 48967471-48969470 Medicago truncatula
Medtr4g117990 2.0kb downstream 2.0kb downstream 3246 true chr4: 48969471-48972716 Medicago truncatula
Medtr4g117990 2.0kb downstream 2.0kb downstream 2000 false chr4: 48970717-48972716 Medicago truncatula
Medtr4g117990 5.0kb upstream 5.0kb upstream 6246 true chr4: 48964471-48970716 Medicago truncatula
Medtr4g117990 5.0kb upstream 5.0kb upstream 5000 false chr4: 48964471-48969470 Medicago truncatula
Medtr4g117990 5.0kb downstream 5.0kb downstream 6246 true chr4: 48969471-48975716 Medicago truncatula
Medtr4g117990 5.0kb downstream 5.0kb downstream 5000 false chr4: 48970717-48975716 Medicago truncatula
Medtr4g117990 10.0kb upstream 10.0kb upstream 11246 true chr4: 48959471-48970716 Medicago truncatula
Medtr4g117990 10.0kb upstream 10.0kb upstream 10000 false chr4: 48959471-48969470 Medicago truncatula
Medtr4g117990 10.0kb downstream 10.0kb downstream 11246 true chr4: 48969471-48980716 Medicago truncatula
Medtr4g117990 10.0kb downstream 10.0kb downstream 10000 false chr4: 48970717-48980716 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311907 5265 Fabidae View MSA
124069508 5270 Rosid View MSA
123747324 5271 Pentapetalae View MSA
122790376 5272 Eudicot View MSA
122048588 5273 Angiosperm View MSA
121351505 5274 Embryophyte View MSA
123382195 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.606       Low
cufflinks 17.037     High High
cufflinks 14.936     High  
cufflinks 17.302     High High
cufflinks 16.195     High  
cufflinks 12.907     High  
cufflinks 9.731       Low
cufflinks 13.678     High  
cufflinks 11.968     High  

0 Strain