Gene : Medtr4g117600 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR33294:SF3 - AWPM-19-LIKE PROTEIN Description:  ABA induced plasma membrane protein
Genomic Order:  6209 Name:  ? Medtr4g117600
Secondary Identifier:  ? PAC:31107670
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g117600 0.5kb upstream 0.5kb upstream 2025 true chr4: 48785610-48787634 Medicago truncatula
Medtr4g117600 0.5kb upstream 0.5kb upstream 500 false chr4: 48785610-48786109 Medicago truncatula
Medtr4g117600 0.5kb downstream 0.5kb downstream 2025 true chr4: 48786110-48788134 Medicago truncatula
Medtr4g117600 0.5kb downstream 0.5kb downstream 500 false chr4: 48787635-48788134 Medicago truncatula
Medtr4g117600 1.0kb upstream 1.0kb upstream 2525 true chr4: 48785110-48787634 Medicago truncatula
Medtr4g117600 1.0kb upstream 1.0kb upstream 1000 false chr4: 48785110-48786109 Medicago truncatula
Medtr4g117600 1.0kb downstream 1.0kb downstream 2525 true chr4: 48786110-48788634 Medicago truncatula
Medtr4g117600 1.0kb downstream 1.0kb downstream 1000 false chr4: 48787635-48788634 Medicago truncatula
Medtr4g117600 2.0kb upstream 2.0kb upstream 3525 true chr4: 48784110-48787634 Medicago truncatula
Medtr4g117600 2.0kb upstream 2.0kb upstream 2000 false chr4: 48784110-48786109 Medicago truncatula
Medtr4g117600 2.0kb downstream 2.0kb downstream 3525 true chr4: 48786110-48789634 Medicago truncatula
Medtr4g117600 2.0kb downstream 2.0kb downstream 2000 false chr4: 48787635-48789634 Medicago truncatula
Medtr4g117600 5.0kb upstream 5.0kb upstream 6525 true chr4: 48781110-48787634 Medicago truncatula
Medtr4g117600 5.0kb upstream 5.0kb upstream 5000 false chr4: 48781110-48786109 Medicago truncatula
Medtr4g117600 5.0kb downstream 5.0kb downstream 6525 true chr4: 48786110-48792634 Medicago truncatula
Medtr4g117600 5.0kb downstream 5.0kb downstream 5000 false chr4: 48787635-48792634 Medicago truncatula
Medtr4g117600 10.0kb upstream 10.0kb upstream 11525 true chr4: 48776110-48787634 Medicago truncatula
Medtr4g117600 10.0kb upstream 10.0kb upstream 10000 false chr4: 48776110-48786109 Medicago truncatula
Medtr4g117600 10.0kb downstream 10.0kb downstream 11525 true chr4: 48786110-48797634 Medicago truncatula
Medtr4g117600 10.0kb downstream 10.0kb downstream 10000 false chr4: 48787635-48797634 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301109 5265 Fabidae View MSA
124066796 5270 Rosid View MSA
123736510 5271 Pentapetalae View MSA
122792358 5272 Eudicot View MSA
122050396 5273 Angiosperm View MSA
121349282 5274 Embryophyte View MSA
123381254 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.225       Low
cufflinks 1.083        
cufflinks 1.466        
cufflinks 4.05       High
cufflinks 1.256        
cufflinks 2.235        
cufflinks 2.528        
cufflinks 1.437        
cufflinks 2.546        

0 Strain