Gene : Medtr4g119120 M. truncatula Mt4.0v1
Defline:  (1 of 210) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Description:  PPR containing plant-like protein
Genomic Order:  6292 Name:  ? Medtr4g119120
Secondary Identifier:  ? PAC:31106768
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g119120 0.5kb upstream 0.5kb upstream 2231 true chr4: 49335188-49337418 Medicago truncatula
Medtr4g119120 0.5kb upstream 0.5kb upstream 500 false chr4: 49335188-49335687 Medicago truncatula
Medtr4g119120 0.5kb downstream 0.5kb downstream 2231 true chr4: 49335688-49337918 Medicago truncatula
Medtr4g119120 0.5kb downstream 0.5kb downstream 500 false chr4: 49337419-49337918 Medicago truncatula
Medtr4g119120 1.0kb upstream 1.0kb upstream 2731 true chr4: 49334688-49337418 Medicago truncatula
Medtr4g119120 1.0kb upstream 1.0kb upstream 1000 false chr4: 49334688-49335687 Medicago truncatula
Medtr4g119120 1.0kb downstream 1.0kb downstream 2731 true chr4: 49335688-49338418 Medicago truncatula
Medtr4g119120 1.0kb downstream 1.0kb downstream 1000 false chr4: 49337419-49338418 Medicago truncatula
Medtr4g119120 2.0kb upstream 2.0kb upstream 3731 true chr4: 49333688-49337418 Medicago truncatula
Medtr4g119120 2.0kb upstream 2.0kb upstream 2000 false chr4: 49333688-49335687 Medicago truncatula
Medtr4g119120 2.0kb downstream 2.0kb downstream 3731 true chr4: 49335688-49339418 Medicago truncatula
Medtr4g119120 2.0kb downstream 2.0kb downstream 2000 false chr4: 49337419-49339418 Medicago truncatula
Medtr4g119120 5.0kb upstream 5.0kb upstream 6731 true chr4: 49330688-49337418 Medicago truncatula
Medtr4g119120 5.0kb upstream 5.0kb upstream 5000 false chr4: 49330688-49335687 Medicago truncatula
Medtr4g119120 5.0kb downstream 5.0kb downstream 6731 true chr4: 49335688-49342418 Medicago truncatula
Medtr4g119120 5.0kb downstream 5.0kb downstream 5000 false chr4: 49337419-49342418 Medicago truncatula
Medtr4g119120 10.0kb upstream 10.0kb upstream 11731 true chr4: 49325688-49337418 Medicago truncatula
Medtr4g119120 10.0kb upstream 10.0kb upstream 10000 false chr4: 49325688-49335687 Medicago truncatula
Medtr4g119120 10.0kb downstream 10.0kb downstream 11731 true chr4: 49335688-49347418 Medicago truncatula
Medtr4g119120 10.0kb downstream 10.0kb downstream 10000 false chr4: 49337419-49347418 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301250 5265 Fabidae View MSA
124069028 5270 Rosid View MSA
123743888 5271 Pentapetalae View MSA
122795257 5272 Eudicot View MSA
122048677 5273 Angiosperm View MSA
121311068 5274 Embryophyte View MSA
123348417 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.896        
cufflinks 1.008        
cufflinks 1.991        
cufflinks 0.296       Low
cufflinks 3.356       High
cufflinks 0.346       Low
cufflinks 0.997        
cufflinks 1.488        
cufflinks 0.898        

0 Strain