Gene : Medtr4g118760 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10809:SF59 - VESICLE-ASSOCIATED PROTEIN 2-2 Description:  VAMP-associated protein
Genomic Order:  6271 Name:  ? Medtr4g118760
Secondary Identifier:  ? PAC:31109626
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g118760 0.5kb upstream 0.5kb upstream 4041 true chr4: 49201062-49205102 Medicago truncatula
Medtr4g118760 0.5kb upstream 0.5kb upstream 500 false chr4: 49201062-49201561 Medicago truncatula
Medtr4g118760 0.5kb downstream 0.5kb downstream 4041 true chr4: 49201562-49205602 Medicago truncatula
Medtr4g118760 0.5kb downstream 0.5kb downstream 500 false chr4: 49205103-49205602 Medicago truncatula
Medtr4g118760 1.0kb upstream 1.0kb upstream 4541 true chr4: 49200562-49205102 Medicago truncatula
Medtr4g118760 1.0kb upstream 1.0kb upstream 1000 false chr4: 49200562-49201561 Medicago truncatula
Medtr4g118760 1.0kb downstream 1.0kb downstream 4541 true chr4: 49201562-49206102 Medicago truncatula
Medtr4g118760 1.0kb downstream 1.0kb downstream 1000 false chr4: 49205103-49206102 Medicago truncatula
Medtr4g118760 2.0kb upstream 2.0kb upstream 5541 true chr4: 49199562-49205102 Medicago truncatula
Medtr4g118760 2.0kb upstream 2.0kb upstream 2000 false chr4: 49199562-49201561 Medicago truncatula
Medtr4g118760 2.0kb downstream 2.0kb downstream 5541 true chr4: 49201562-49207102 Medicago truncatula
Medtr4g118760 2.0kb downstream 2.0kb downstream 2000 false chr4: 49205103-49207102 Medicago truncatula
Medtr4g118760 5.0kb upstream 5.0kb upstream 8541 true chr4: 49196562-49205102 Medicago truncatula
Medtr4g118760 5.0kb upstream 5.0kb upstream 5000 false chr4: 49196562-49201561 Medicago truncatula
Medtr4g118760 5.0kb downstream 5.0kb downstream 8541 true chr4: 49201562-49210102 Medicago truncatula
Medtr4g118760 5.0kb downstream 5.0kb downstream 5000 false chr4: 49205103-49210102 Medicago truncatula
Medtr4g118760 10.0kb upstream 10.0kb upstream 13541 true chr4: 49191562-49205102 Medicago truncatula
Medtr4g118760 10.0kb upstream 10.0kb upstream 10000 false chr4: 49191562-49201561 Medicago truncatula
Medtr4g118760 10.0kb downstream 10.0kb downstream 13541 true chr4: 49201562-49215102 Medicago truncatula
Medtr4g118760 10.0kb downstream 10.0kb downstream 10000 false chr4: 49205103-49215102 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300378 5265 Fabidae View MSA
124070661 5270 Rosid View MSA
123750934 5271 Pentapetalae View MSA
122796486 5272 Eudicot View MSA
122049501 5273 Angiosperm View MSA
121311441 5274 Embryophyte View MSA
123348736 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.041     Low Low
cufflinks 0.191        
cufflinks 0.122        
cufflinks 0.408        
cufflinks 0.366        
cufflinks 0.39        
cufflinks 0.415        
cufflinks 0.148        
cufflinks 1.008       High

0 Strain