Gene : Medtr4g119500 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11064:SF42 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-5 Description:  nuclear transcription factor Y protein
Genomic Order:  6319 Name:  ? Medtr4g119500
Secondary Identifier:  ? PAC:31108960
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g119500 0.5kb upstream 0.5kb upstream 1204 true chr4: 49536317-49537520 Medicago truncatula
Medtr4g119500 0.5kb upstream 0.5kb upstream 500 false chr4: 49537021-49537520 Medicago truncatula
Medtr4g119500 0.5kb downstream 0.5kb downstream 1204 true chr4: 49535817-49537020 Medicago truncatula
Medtr4g119500 0.5kb downstream 0.5kb downstream 500 false chr4: 49535817-49536316 Medicago truncatula
Medtr4g119500 1.0kb upstream 1.0kb upstream 1704 true chr4: 49536317-49538020 Medicago truncatula
Medtr4g119500 1.0kb upstream 1.0kb upstream 1000 false chr4: 49537021-49538020 Medicago truncatula
Medtr4g119500 1.0kb downstream 1.0kb downstream 1704 true chr4: 49535317-49537020 Medicago truncatula
Medtr4g119500 1.0kb downstream 1.0kb downstream 1000 false chr4: 49535317-49536316 Medicago truncatula
Medtr4g119500 2.0kb upstream 2.0kb upstream 2704 true chr4: 49536317-49539020 Medicago truncatula
Medtr4g119500 2.0kb upstream 2.0kb upstream 2000 false chr4: 49537021-49539020 Medicago truncatula
Medtr4g119500 2.0kb downstream 2.0kb downstream 2704 true chr4: 49534317-49537020 Medicago truncatula
Medtr4g119500 2.0kb downstream 2.0kb downstream 2000 false chr4: 49534317-49536316 Medicago truncatula
Medtr4g119500 5.0kb upstream 5.0kb upstream 5704 true chr4: 49536317-49542020 Medicago truncatula
Medtr4g119500 5.0kb upstream 5.0kb upstream 5000 false chr4: 49537021-49542020 Medicago truncatula
Medtr4g119500 5.0kb downstream 5.0kb downstream 5704 true chr4: 49531317-49537020 Medicago truncatula
Medtr4g119500 5.0kb downstream 5.0kb downstream 5000 false chr4: 49531317-49536316 Medicago truncatula
Medtr4g119500 10.0kb upstream 10.0kb upstream 10704 true chr4: 49536317-49547020 Medicago truncatula
Medtr4g119500 10.0kb upstream 10.0kb upstream 10000 false chr4: 49537021-49547020 Medicago truncatula
Medtr4g119500 10.0kb downstream 10.0kb downstream 10704 true chr4: 49526317-49537020 Medicago truncatula
Medtr4g119500 10.0kb downstream 10.0kb downstream 10000 false chr4: 49526317-49536316 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041139 5273 Angiosperm View MSA
122315080 5265 Fabidae View MSA
124070521 5270 Rosid View MSA
123747842 5271 Pentapetalae View MSA
122796503 5272 Eudicot View MSA
123429094 5275 Viridiplantae View MSA
121350139 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.041        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.094     Low  

0 Strain