Gene : Medtr4g120130 M. truncatula Mt4.0v1
Defline:  (1 of 2) 1.1.1.35//4.2.1.17//4.2.1.55//5.1.2.3//5.3.3.8 - 3-hydroxyacyl-CoA dehydrogenase / Beta-keto-reductase // Enoyl-CoA hydratase / Unsaturated acyl-CoA hydratase // 3-hydroxybutyryl-CoA dehydratase / Crotonase // Dodecenoyl-CoA isomerase / Dodecenoyl-CoA Delta-isomerase Description:  glyoxysomal fatty acid beta-oxidation MFP-A protein
Genomic Order:  6360 Name:  ? Medtr4g120130
Secondary Identifier:  ? PAC:31114286
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11 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula ILEUDEG-PWY Medicago truncatula pathologic  
Mtruncatula PWY-5136 Medicago truncatula pathologic  
Mtruncatula PWY-5137 Medicago truncatula pathologic  
Mtruncatula PWY-5138 Medicago truncatula pathologic  
Mtruncatula PWY-561 Medicago truncatula pathologic  
Mtruncatula PWY-6435 Medicago truncatula pathologic  
Mtruncatula PWY-6837 Medicago truncatula pathologic  
Mtruncatula PWY-7036 Medicago truncatula pathologic  
Mtruncatula PWY-735 Medicago truncatula pathologic  
Mtruncatula PWY-7606 Medicago truncatula pathologic  
Mtruncatula VALDEG-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g120130 0.5kb upstream 0.5kb upstream 8793 true chr4: 49795592-49804384 Medicago truncatula
Medtr4g120130 0.5kb upstream 0.5kb upstream 500 false chr4: 49803885-49804384 Medicago truncatula
Medtr4g120130 0.5kb downstream 0.5kb downstream 8793 true chr4: 49795092-49803884 Medicago truncatula
Medtr4g120130 0.5kb downstream 0.5kb downstream 500 false chr4: 49795092-49795591 Medicago truncatula
Medtr4g120130 1.0kb upstream 1.0kb upstream 9293 true chr4: 49795592-49804884 Medicago truncatula
Medtr4g120130 1.0kb upstream 1.0kb upstream 1000 false chr4: 49803885-49804884 Medicago truncatula
Medtr4g120130 1.0kb downstream 1.0kb downstream 9293 true chr4: 49794592-49803884 Medicago truncatula
Medtr4g120130 1.0kb downstream 1.0kb downstream 1000 false chr4: 49794592-49795591 Medicago truncatula
Medtr4g120130 2.0kb upstream 2.0kb upstream 10293 true chr4: 49795592-49805884 Medicago truncatula
Medtr4g120130 2.0kb upstream 2.0kb upstream 2000 false chr4: 49803885-49805884 Medicago truncatula
Medtr4g120130 2.0kb downstream 2.0kb downstream 10293 true chr4: 49793592-49803884 Medicago truncatula
Medtr4g120130 2.0kb downstream 2.0kb downstream 2000 false chr4: 49793592-49795591 Medicago truncatula
Medtr4g120130 5.0kb upstream 5.0kb upstream 13293 true chr4: 49795592-49808884 Medicago truncatula
Medtr4g120130 5.0kb upstream 5.0kb upstream 5000 false chr4: 49803885-49808884 Medicago truncatula
Medtr4g120130 5.0kb downstream 5.0kb downstream 13293 true chr4: 49790592-49803884 Medicago truncatula
Medtr4g120130 5.0kb downstream 5.0kb downstream 5000 false chr4: 49790592-49795591 Medicago truncatula
Medtr4g120130 10.0kb upstream 10.0kb upstream 18293 true chr4: 49795592-49813884 Medicago truncatula
Medtr4g120130 10.0kb upstream 10.0kb upstream 10000 false chr4: 49803885-49813884 Medicago truncatula
Medtr4g120130 10.0kb downstream 10.0kb downstream 18293 true chr4: 49785592-49803884 Medicago truncatula
Medtr4g120130 10.0kb downstream 10.0kb downstream 10000 false chr4: 49785592-49795591 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301704 5265 Fabidae View MSA
124061936 5270 Rosid View MSA
123740661 5271 Pentapetalae View MSA
122785876 5272 Eudicot View MSA
122047259 5273 Angiosperm View MSA
121345387 5274 Embryophyte View MSA
123424743 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.115        
cufflinks 9.13        
cufflinks 15.145     High High
cufflinks 1.245        
cufflinks 6.947        
cufflinks 0.888       Low
cufflinks 1.372        
cufflinks 11.248     High High
cufflinks 1.821        

0 Strain