Gene : Medtr4g119990 M. truncatula Mt4.0v1
Defline:  (1 of 127) PF02362 - B3 DNA binding domain (B3) Description:  B3 DNA-binding domain protein
Genomic Order:  6352 Name:  ? Medtr4g119990
Secondary Identifier:  ? PAC:31113427
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g119990 0.5kb upstream 0.5kb upstream 3733 true chr4: 49741659-49745391 Medicago truncatula
Medtr4g119990 0.5kb upstream 0.5kb upstream 500 false chr4: 49741659-49742158 Medicago truncatula
Medtr4g119990 0.5kb downstream 0.5kb downstream 3733 true chr4: 49742159-49745891 Medicago truncatula
Medtr4g119990 0.5kb downstream 0.5kb downstream 500 false chr4: 49745392-49745891 Medicago truncatula
Medtr4g119990 1.0kb upstream 1.0kb upstream 4233 true chr4: 49741159-49745391 Medicago truncatula
Medtr4g119990 1.0kb upstream 1.0kb upstream 1000 false chr4: 49741159-49742158 Medicago truncatula
Medtr4g119990 1.0kb downstream 1.0kb downstream 4233 true chr4: 49742159-49746391 Medicago truncatula
Medtr4g119990 1.0kb downstream 1.0kb downstream 1000 false chr4: 49745392-49746391 Medicago truncatula
Medtr4g119990 2.0kb upstream 2.0kb upstream 5233 true chr4: 49740159-49745391 Medicago truncatula
Medtr4g119990 2.0kb upstream 2.0kb upstream 2000 false chr4: 49740159-49742158 Medicago truncatula
Medtr4g119990 2.0kb downstream 2.0kb downstream 5233 true chr4: 49742159-49747391 Medicago truncatula
Medtr4g119990 2.0kb downstream 2.0kb downstream 2000 false chr4: 49745392-49747391 Medicago truncatula
Medtr4g119990 5.0kb upstream 5.0kb upstream 8233 true chr4: 49737159-49745391 Medicago truncatula
Medtr4g119990 5.0kb upstream 5.0kb upstream 5000 false chr4: 49737159-49742158 Medicago truncatula
Medtr4g119990 5.0kb downstream 5.0kb downstream 8233 true chr4: 49742159-49750391 Medicago truncatula
Medtr4g119990 5.0kb downstream 5.0kb downstream 5000 false chr4: 49745392-49750391 Medicago truncatula
Medtr4g119990 10.0kb upstream 10.0kb upstream 13233 true chr4: 49732159-49745391 Medicago truncatula
Medtr4g119990 10.0kb upstream 10.0kb upstream 10000 false chr4: 49732159-49742158 Medicago truncatula
Medtr4g119990 10.0kb downstream 10.0kb downstream 13233 true chr4: 49742159-49755391 Medicago truncatula
Medtr4g119990 10.0kb downstream 10.0kb downstream 10000 false chr4: 49745392-49755391 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313165 5265 Fabidae View MSA
124073823 5270 Rosid View MSA
123753418 5271 Pentapetalae View MSA
122797829 5272 Eudicot View MSA
122050133 5273 Angiosperm View MSA
121350826 5274 Embryophyte View MSA
123427153 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.037     Low  
cufflinks 0.4        
cufflinks 0.419        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.154        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.43        
cufflinks 0.023     Low  

0 Strain