Gene : Medtr4g121880 M. truncatula Mt4.0v1
Defline:  (1 of 3) 1.8.1.4 - Dihydrolipoyl dehydrogenase / Lipoyl dehydrogenase Description:  dihydrolipoamide dehydrogenase
Genomic Order:  6430 Name:  ? Medtr4g121880
Secondary Identifier:  ? PAC:31108997
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula GLYCLEAV-PWY Medicago truncatula pathologic  
Mtruncatula PWY-5046 Medicago truncatula pathologic  
Mtruncatula PWY-5084 Medicago truncatula pathologic  
Mtruncatula PWY-5173 Medicago truncatula pathologic  
Mtruncatula PWY-5464 Medicago truncatula pathologic  
Mtruncatula PYRUVDEHYD-PWY Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g121880 0.5kb upstream 0.5kb upstream 8099 true chr4: 50292139-50300237 Medicago truncatula
Medtr4g121880 0.5kb upstream 0.5kb upstream 500 false chr4: 50299738-50300237 Medicago truncatula
Medtr4g121880 0.5kb downstream 0.5kb downstream 8099 true chr4: 50291639-50299737 Medicago truncatula
Medtr4g121880 0.5kb downstream 0.5kb downstream 500 false chr4: 50291639-50292138 Medicago truncatula
Medtr4g121880 1.0kb upstream 1.0kb upstream 8599 true chr4: 50292139-50300737 Medicago truncatula
Medtr4g121880 1.0kb upstream 1.0kb upstream 1000 false chr4: 50299738-50300737 Medicago truncatula
Medtr4g121880 1.0kb downstream 1.0kb downstream 8599 true chr4: 50291139-50299737 Medicago truncatula
Medtr4g121880 1.0kb downstream 1.0kb downstream 1000 false chr4: 50291139-50292138 Medicago truncatula
Medtr4g121880 2.0kb upstream 2.0kb upstream 9599 true chr4: 50292139-50301737 Medicago truncatula
Medtr4g121880 2.0kb upstream 2.0kb upstream 2000 false chr4: 50299738-50301737 Medicago truncatula
Medtr4g121880 2.0kb downstream 2.0kb downstream 9599 true chr4: 50290139-50299737 Medicago truncatula
Medtr4g121880 2.0kb downstream 2.0kb downstream 2000 false chr4: 50290139-50292138 Medicago truncatula
Medtr4g121880 5.0kb upstream 5.0kb upstream 12599 true chr4: 50292139-50304737 Medicago truncatula
Medtr4g121880 5.0kb upstream 5.0kb upstream 5000 false chr4: 50299738-50304737 Medicago truncatula
Medtr4g121880 5.0kb downstream 5.0kb downstream 12599 true chr4: 50287139-50299737 Medicago truncatula
Medtr4g121880 5.0kb downstream 5.0kb downstream 5000 false chr4: 50287139-50292138 Medicago truncatula
Medtr4g121880 10.0kb upstream 10.0kb upstream 17599 true chr4: 50292139-50309737 Medicago truncatula
Medtr4g121880 10.0kb upstream 10.0kb upstream 10000 false chr4: 50299738-50309737 Medicago truncatula
Medtr4g121880 10.0kb downstream 10.0kb downstream 17599 true chr4: 50282139-50299737 Medicago truncatula
Medtr4g121880 10.0kb downstream 10.0kb downstream 10000 false chr4: 50282139-50292138 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041061 5273 Angiosperm View MSA
122307592 5265 Fabidae View MSA
124065612 5270 Rosid View MSA
123745310 5271 Pentapetalae View MSA
122789628 5272 Eudicot View MSA
121346469 5274 Embryophyte View MSA
123424550 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.852       Low
cufflinks 3.756        
cufflinks 6.341        
cufflinks 2.45        
cufflinks 6.928       High
cufflinks 1.175       Low
cufflinks 4.033        
cufflinks 4.904        
cufflinks 5.328        

0 Strain