Gene : Medtr4g121470 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12947:SF4 - REGULATOR OF FREE UBIQUITIN CHAINS 1 Description:  AMSH-like ubiquitin thioesterase-like protein
Genomic Order:  6414 Name:  ? Medtr4g121470
Secondary Identifier:  ? PAC:31112893
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g121470 0.5kb upstream 0.5kb upstream 8625 true chr4: 50208834-50217458 Medicago truncatula
Medtr4g121470 0.5kb upstream 0.5kb upstream 500 false chr4: 50216959-50217458 Medicago truncatula
Medtr4g121470 0.5kb downstream 0.5kb downstream 8625 true chr4: 50208334-50216958 Medicago truncatula
Medtr4g121470 0.5kb downstream 0.5kb downstream 500 false chr4: 50208334-50208833 Medicago truncatula
Medtr4g121470 1.0kb upstream 1.0kb upstream 9125 true chr4: 50208834-50217958 Medicago truncatula
Medtr4g121470 1.0kb upstream 1.0kb upstream 1000 false chr4: 50216959-50217958 Medicago truncatula
Medtr4g121470 1.0kb downstream 1.0kb downstream 9125 true chr4: 50207834-50216958 Medicago truncatula
Medtr4g121470 1.0kb downstream 1.0kb downstream 1000 false chr4: 50207834-50208833 Medicago truncatula
Medtr4g121470 2.0kb upstream 2.0kb upstream 10125 true chr4: 50208834-50218958 Medicago truncatula
Medtr4g121470 2.0kb upstream 2.0kb upstream 2000 false chr4: 50216959-50218958 Medicago truncatula
Medtr4g121470 2.0kb downstream 2.0kb downstream 10125 true chr4: 50206834-50216958 Medicago truncatula
Medtr4g121470 2.0kb downstream 2.0kb downstream 2000 false chr4: 50206834-50208833 Medicago truncatula
Medtr4g121470 5.0kb upstream 5.0kb upstream 13125 true chr4: 50208834-50221958 Medicago truncatula
Medtr4g121470 5.0kb upstream 5.0kb upstream 5000 false chr4: 50216959-50221958 Medicago truncatula
Medtr4g121470 5.0kb downstream 5.0kb downstream 13125 true chr4: 50203834-50216958 Medicago truncatula
Medtr4g121470 5.0kb downstream 5.0kb downstream 5000 false chr4: 50203834-50208833 Medicago truncatula
Medtr4g121470 10.0kb upstream 10.0kb upstream 18125 true chr4: 50208834-50226958 Medicago truncatula
Medtr4g121470 10.0kb upstream 10.0kb upstream 10000 false chr4: 50216959-50226958 Medicago truncatula
Medtr4g121470 10.0kb downstream 10.0kb downstream 18125 true chr4: 50198834-50216958 Medicago truncatula
Medtr4g121470 10.0kb downstream 10.0kb downstream 10000 false chr4: 50198834-50208833 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303741 5265 Fabidae View MSA
124061741 5270 Rosid View MSA
123740701 5271 Pentapetalae View MSA
122792659 5272 Eudicot View MSA
122049356 5273 Angiosperm View MSA
121351478 5274 Embryophyte View MSA
123425499 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.403       High
cufflinks 1.231        
cufflinks 1.426        
cufflinks 1.774        
cufflinks 1.228        
cufflinks 0.651       Low
cufflinks 2.034        
cufflinks 1.131        
cufflinks 2.197        

0 Strain