Gene : Medtr4g121600 M. truncatula Mt4.0v1
Defline:  (1 of 2) 6.2.1.1//6.2.1.2 - Acetate--CoA ligase / Acyl-activating enzyme // Butyrate--CoA ligase / Fatty acid thiokinase (medium chain) Description:  acetate/butyrate-CoA ligase AAE7, peroxisomal protein
Genomic Order:  6425 Name:  ? Medtr4g121600
Secondary Identifier:  ? PAC:31110285
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13 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-1121 Medicago truncatula pathologic  
Mtruncatula PWY-321 Medicago truncatula pathologic  
Mtruncatula PWY-5136 Medicago truncatula pathologic  
Mtruncatula PWY-5143 Medicago truncatula pathologic  
Mtruncatula PWY-5147 Medicago truncatula pathologic  
Mtruncatula PWY-5156 Medicago truncatula pathologic  
Mtruncatula PWY-561 Medicago truncatula pathologic  
Mtruncatula PWY-5885 Medicago truncatula pathologic  
Mtruncatula PWY-5971 Medicago truncatula pathologic  
Mtruncatula PWY-5989 Medicago truncatula pathologic  
Mtruncatula PWY66-21 Medicago truncatula pathologic  
Mtruncatula PWY-6733 Medicago truncatula pathologic  
Mtruncatula PWY-6803 Medicago truncatula pathologic  

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g121600 0.5kb upstream 0.5kb upstream 3618 true chr4: 50255222-50258839 Medicago truncatula
Medtr4g121600 0.5kb upstream 0.5kb upstream 500 false chr4: 50258340-50258839 Medicago truncatula
Medtr4g121600 0.5kb downstream 0.5kb downstream 3618 true chr4: 50254722-50258339 Medicago truncatula
Medtr4g121600 0.5kb downstream 0.5kb downstream 500 false chr4: 50254722-50255221 Medicago truncatula
Medtr4g121600 1.0kb upstream 1.0kb upstream 4118 true chr4: 50255222-50259339 Medicago truncatula
Medtr4g121600 1.0kb upstream 1.0kb upstream 1000 false chr4: 50258340-50259339 Medicago truncatula
Medtr4g121600 1.0kb downstream 1.0kb downstream 4118 true chr4: 50254222-50258339 Medicago truncatula
Medtr4g121600 1.0kb downstream 1.0kb downstream 1000 false chr4: 50254222-50255221 Medicago truncatula
Medtr4g121600 2.0kb upstream 2.0kb upstream 5118 true chr4: 50255222-50260339 Medicago truncatula
Medtr4g121600 2.0kb upstream 2.0kb upstream 2000 false chr4: 50258340-50260339 Medicago truncatula
Medtr4g121600 2.0kb downstream 2.0kb downstream 5118 true chr4: 50253222-50258339 Medicago truncatula
Medtr4g121600 2.0kb downstream 2.0kb downstream 2000 false chr4: 50253222-50255221 Medicago truncatula
Medtr4g121600 5.0kb upstream 5.0kb upstream 8118 true chr4: 50255222-50263339 Medicago truncatula
Medtr4g121600 5.0kb upstream 5.0kb upstream 5000 false chr4: 50258340-50263339 Medicago truncatula
Medtr4g121600 5.0kb downstream 5.0kb downstream 8118 true chr4: 50250222-50258339 Medicago truncatula
Medtr4g121600 5.0kb downstream 5.0kb downstream 5000 false chr4: 50250222-50255221 Medicago truncatula
Medtr4g121600 10.0kb upstream 10.0kb upstream 13118 true chr4: 50255222-50268339 Medicago truncatula
Medtr4g121600 10.0kb upstream 10.0kb upstream 10000 false chr4: 50258340-50268339 Medicago truncatula
Medtr4g121600 10.0kb downstream 10.0kb downstream 13118 true chr4: 50245222-50258339 Medicago truncatula
Medtr4g121600 10.0kb downstream 10.0kb downstream 10000 false chr4: 50245222-50255221 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308725 5265 Fabidae View MSA
124067015 5270 Rosid View MSA
123740206 5271 Pentapetalae View MSA
122793693 5272 Eudicot View MSA
122045241 5273 Angiosperm View MSA
121345073 5274 Embryophyte View MSA
123427881 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.265       Low
cufflinks 19.214     High  
cufflinks 38.308     High High
cufflinks 26.957     High  
cufflinks 15.096     High  
cufflinks 13.156     High  
cufflinks 21.839     High  
cufflinks 25.042     High  
cufflinks 41.966     High High

0 Strain