Gene : Medtr4g121080 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR31052:SF3 - COBRA-LIKE PROTEIN 7-RELATED Description:  COBRA-like protein 7 precursor
Genomic Order:  6408 Name:  ? Medtr4g121080
Secondary Identifier:  ? PAC:31111220
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g121080 0.5kb upstream 0.5kb upstream 5662 true chr4: 50128943-50134604 Medicago truncatula
Medtr4g121080 0.5kb upstream 0.5kb upstream 500 false chr4: 50134105-50134604 Medicago truncatula
Medtr4g121080 0.5kb downstream 0.5kb downstream 5662 true chr4: 50128443-50134104 Medicago truncatula
Medtr4g121080 0.5kb downstream 0.5kb downstream 500 false chr4: 50128443-50128942 Medicago truncatula
Medtr4g121080 1.0kb upstream 1.0kb upstream 6162 true chr4: 50128943-50135104 Medicago truncatula
Medtr4g121080 1.0kb upstream 1.0kb upstream 1000 false chr4: 50134105-50135104 Medicago truncatula
Medtr4g121080 1.0kb downstream 1.0kb downstream 6162 true chr4: 50127943-50134104 Medicago truncatula
Medtr4g121080 1.0kb downstream 1.0kb downstream 1000 false chr4: 50127943-50128942 Medicago truncatula
Medtr4g121080 2.0kb upstream 2.0kb upstream 7162 true chr4: 50128943-50136104 Medicago truncatula
Medtr4g121080 2.0kb upstream 2.0kb upstream 2000 false chr4: 50134105-50136104 Medicago truncatula
Medtr4g121080 2.0kb downstream 2.0kb downstream 7162 true chr4: 50126943-50134104 Medicago truncatula
Medtr4g121080 2.0kb downstream 2.0kb downstream 2000 false chr4: 50126943-50128942 Medicago truncatula
Medtr4g121080 5.0kb upstream 5.0kb upstream 10162 true chr4: 50128943-50139104 Medicago truncatula
Medtr4g121080 5.0kb upstream 5.0kb upstream 5000 false chr4: 50134105-50139104 Medicago truncatula
Medtr4g121080 5.0kb downstream 5.0kb downstream 10162 true chr4: 50123943-50134104 Medicago truncatula
Medtr4g121080 5.0kb downstream 5.0kb downstream 5000 false chr4: 50123943-50128942 Medicago truncatula
Medtr4g121080 10.0kb upstream 10.0kb upstream 15162 true chr4: 50128943-50144104 Medicago truncatula
Medtr4g121080 10.0kb upstream 10.0kb upstream 10000 false chr4: 50134105-50144104 Medicago truncatula
Medtr4g121080 10.0kb downstream 10.0kb downstream 15162 true chr4: 50118943-50134104 Medicago truncatula
Medtr4g121080 10.0kb downstream 10.0kb downstream 10000 false chr4: 50118943-50128942 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307194 5265 Fabidae View MSA
124061230 5270 Rosid View MSA
123750935 5271 Pentapetalae View MSA
122797556 5272 Eudicot View MSA
122048616 5273 Angiosperm View MSA
121351657 5274 Embryophyte View MSA
123382264 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.828     High High
cufflinks 3.083        
cufflinks 3.616        
cufflinks 11.214     High  
cufflinks 2.827        
cufflinks 10.806     High  
cufflinks 10.852     High  
cufflinks 2.145       Low
cufflinks 21.689     High High

0 Strain