Gene : Medtr4g120900 M. truncatula Mt4.0v1
Defline:  (1 of 7) PTHR22847:SF424 - TOPLESS-RELATED PROTEIN 2-RELATED Description:  topless-like protein
Genomic Order:  6385 Name:  ? Medtr4g120900
Secondary Identifier:  ? PAC:31114950
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g120900 0.5kb upstream 0.5kb upstream 8496 true chr4: 49953698-49962193 Medicago truncatula
Medtr4g120900 0.5kb upstream 0.5kb upstream 500 false chr4: 49953698-49954197 Medicago truncatula
Medtr4g120900 0.5kb downstream 0.5kb downstream 8496 true chr4: 49954198-49962693 Medicago truncatula
Medtr4g120900 0.5kb downstream 0.5kb downstream 500 false chr4: 49962194-49962693 Medicago truncatula
Medtr4g120900 1.0kb upstream 1.0kb upstream 8996 true chr4: 49953198-49962193 Medicago truncatula
Medtr4g120900 1.0kb upstream 1.0kb upstream 1000 false chr4: 49953198-49954197 Medicago truncatula
Medtr4g120900 1.0kb downstream 1.0kb downstream 8996 true chr4: 49954198-49963193 Medicago truncatula
Medtr4g120900 1.0kb downstream 1.0kb downstream 1000 false chr4: 49962194-49963193 Medicago truncatula
Medtr4g120900 2.0kb upstream 2.0kb upstream 9996 true chr4: 49952198-49962193 Medicago truncatula
Medtr4g120900 2.0kb upstream 2.0kb upstream 2000 false chr4: 49952198-49954197 Medicago truncatula
Medtr4g120900 2.0kb downstream 2.0kb downstream 9996 true chr4: 49954198-49964193 Medicago truncatula
Medtr4g120900 2.0kb downstream 2.0kb downstream 2000 false chr4: 49962194-49964193 Medicago truncatula
Medtr4g120900 5.0kb upstream 5.0kb upstream 12996 true chr4: 49949198-49962193 Medicago truncatula
Medtr4g120900 5.0kb upstream 5.0kb upstream 5000 false chr4: 49949198-49954197 Medicago truncatula
Medtr4g120900 5.0kb downstream 5.0kb downstream 12996 true chr4: 49954198-49967193 Medicago truncatula
Medtr4g120900 5.0kb downstream 5.0kb downstream 5000 false chr4: 49962194-49967193 Medicago truncatula
Medtr4g120900 10.0kb upstream 10.0kb upstream 17996 true chr4: 49944198-49962193 Medicago truncatula
Medtr4g120900 10.0kb upstream 10.0kb upstream 10000 false chr4: 49944198-49954197 Medicago truncatula
Medtr4g120900 10.0kb downstream 10.0kb downstream 17996 true chr4: 49954198-49972193 Medicago truncatula
Medtr4g120900 10.0kb downstream 10.0kb downstream 10000 false chr4: 49962194-49972193 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026551 5273 Angiosperm View MSA
122313709 5265 Fabidae View MSA
124065590 5270 Rosid View MSA
123741306 5271 Pentapetalae View MSA
122793057 5272 Eudicot View MSA
121296383 5274 Embryophyte View MSA
123334555 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.7        
cufflinks 13.857     High High
cufflinks 7.853        
cufflinks 3.782       Low
cufflinks 9.852        
cufflinks 3.761       Low
cufflinks 8.12        
cufflinks 8.118        
cufflinks 8.907        

0 Strain