Gene : Medtr4g122110 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR21495//PTHR21495:SF69 - NUCLEOPORIN-RELATED Description:  disease resistance-responsive, dirigent domain protein
Genomic Order:  6446 Name:  ? Medtr4g122110
Secondary Identifier:  ? PAC:31107481
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g122110 0.5kb upstream 0.5kb upstream 1478 true chr4: 50421896-50423373 Medicago truncatula
Medtr4g122110 0.5kb upstream 0.5kb upstream 500 false chr4: 50421896-50422395 Medicago truncatula
Medtr4g122110 0.5kb downstream 0.5kb downstream 1478 true chr4: 50422396-50423873 Medicago truncatula
Medtr4g122110 0.5kb downstream 0.5kb downstream 500 false chr4: 50423374-50423873 Medicago truncatula
Medtr4g122110 1.0kb upstream 1.0kb upstream 1978 true chr4: 50421396-50423373 Medicago truncatula
Medtr4g122110 1.0kb upstream 1.0kb upstream 1000 false chr4: 50421396-50422395 Medicago truncatula
Medtr4g122110 1.0kb downstream 1.0kb downstream 1978 true chr4: 50422396-50424373 Medicago truncatula
Medtr4g122110 1.0kb downstream 1.0kb downstream 1000 false chr4: 50423374-50424373 Medicago truncatula
Medtr4g122110 2.0kb upstream 2.0kb upstream 2978 true chr4: 50420396-50423373 Medicago truncatula
Medtr4g122110 2.0kb upstream 2.0kb upstream 2000 false chr4: 50420396-50422395 Medicago truncatula
Medtr4g122110 2.0kb downstream 2.0kb downstream 2978 true chr4: 50422396-50425373 Medicago truncatula
Medtr4g122110 2.0kb downstream 2.0kb downstream 2000 false chr4: 50423374-50425373 Medicago truncatula
Medtr4g122110 5.0kb upstream 5.0kb upstream 5978 true chr4: 50417396-50423373 Medicago truncatula
Medtr4g122110 5.0kb upstream 5.0kb upstream 5000 false chr4: 50417396-50422395 Medicago truncatula
Medtr4g122110 5.0kb downstream 5.0kb downstream 5978 true chr4: 50422396-50428373 Medicago truncatula
Medtr4g122110 5.0kb downstream 5.0kb downstream 5000 false chr4: 50423374-50428373 Medicago truncatula
Medtr4g122110 10.0kb upstream 10.0kb upstream 10978 true chr4: 50412396-50423373 Medicago truncatula
Medtr4g122110 10.0kb upstream 10.0kb upstream 10000 false chr4: 50412396-50422395 Medicago truncatula
Medtr4g122110 10.0kb downstream 10.0kb downstream 10978 true chr4: 50422396-50433373 Medicago truncatula
Medtr4g122110 10.0kb downstream 10.0kb downstream 10000 false chr4: 50423374-50433373 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779389 5273 Angiosperm View MSA
122314276 5265 Fabidae View MSA
124069736 5270 Rosid View MSA
123742633 5271 Pentapetalae View MSA
122770334 5272 Eudicot View MSA
121351582 5274 Embryophyte View MSA
123382236 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.985        
cufflinks 0.015     Low Low
cufflinks 0.031     Low  
cufflinks 4.866        
cufflinks 0.01     Low Low
cufflinks 6.252        
cufflinks 2.984        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.479        

0 Strain