Gene : Medtr4g122160 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23257:SF485 - PAS DOMAIN-CONTAINING PROTEIN TYROSINE KINASE Description:  PAS domain tyrosine kinase family protein
Genomic Order:  6449 Name:  ? Medtr4g122160
Secondary Identifier:  ? PAC:31110596
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g122160 0.5kb upstream 0.5kb upstream 7523 true chr4: 50439418-50446940 Medicago truncatula
Medtr4g122160 0.5kb upstream 0.5kb upstream 500 false chr4: 50446441-50446940 Medicago truncatula
Medtr4g122160 0.5kb downstream 0.5kb downstream 7523 true chr4: 50438918-50446440 Medicago truncatula
Medtr4g122160 0.5kb downstream 0.5kb downstream 500 false chr4: 50438918-50439417 Medicago truncatula
Medtr4g122160 1.0kb upstream 1.0kb upstream 8023 true chr4: 50439418-50447440 Medicago truncatula
Medtr4g122160 1.0kb upstream 1.0kb upstream 1000 false chr4: 50446441-50447440 Medicago truncatula
Medtr4g122160 1.0kb downstream 1.0kb downstream 8023 true chr4: 50438418-50446440 Medicago truncatula
Medtr4g122160 1.0kb downstream 1.0kb downstream 1000 false chr4: 50438418-50439417 Medicago truncatula
Medtr4g122160 2.0kb upstream 2.0kb upstream 9023 true chr4: 50439418-50448440 Medicago truncatula
Medtr4g122160 2.0kb upstream 2.0kb upstream 2000 false chr4: 50446441-50448440 Medicago truncatula
Medtr4g122160 2.0kb downstream 2.0kb downstream 9023 true chr4: 50437418-50446440 Medicago truncatula
Medtr4g122160 2.0kb downstream 2.0kb downstream 2000 false chr4: 50437418-50439417 Medicago truncatula
Medtr4g122160 5.0kb upstream 5.0kb upstream 12023 true chr4: 50439418-50451440 Medicago truncatula
Medtr4g122160 5.0kb upstream 5.0kb upstream 5000 false chr4: 50446441-50451440 Medicago truncatula
Medtr4g122160 5.0kb downstream 5.0kb downstream 12023 true chr4: 50434418-50446440 Medicago truncatula
Medtr4g122160 5.0kb downstream 5.0kb downstream 5000 false chr4: 50434418-50439417 Medicago truncatula
Medtr4g122160 10.0kb upstream 10.0kb upstream 17023 true chr4: 50439418-50456440 Medicago truncatula
Medtr4g122160 10.0kb upstream 10.0kb upstream 10000 false chr4: 50446441-50456440 Medicago truncatula
Medtr4g122160 10.0kb downstream 10.0kb downstream 17023 true chr4: 50429418-50446440 Medicago truncatula
Medtr4g122160 10.0kb downstream 10.0kb downstream 10000 false chr4: 50429418-50439417 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311561 5265 Fabidae View MSA
124062417 5270 Rosid View MSA
123745190 5271 Pentapetalae View MSA
122793223 5272 Eudicot View MSA
122045433 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121310448 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.627       High
cufflinks 1.688        
cufflinks 1.857        
cufflinks 0.858        
cufflinks 2.421       High
cufflinks 0.483       Low
cufflinks 1.222        
cufflinks 1.511        
cufflinks 0.8        

0 Strain