Gene : Medtr5g019790 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12320:SF16 - PROTEIN PHOSPHATASE 2C 80-RELATED Description:  protein phosphatase 2C family protein
Genomic Order:  1084 Name:  ? Medtr5g019790
Secondary Identifier:  ? PAC:31086090
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g019790 0.5kb upstream 0.5kb upstream 3694 true chr5: 7501168-7504861 Medicago truncatula
Medtr5g019790 0.5kb upstream 0.5kb upstream 500 false chr5: 7504362-7504861 Medicago truncatula
Medtr5g019790 0.5kb downstream 0.5kb downstream 3694 true chr5: 7500668-7504361 Medicago truncatula
Medtr5g019790 0.5kb downstream 0.5kb downstream 500 false chr5: 7500668-7501167 Medicago truncatula
Medtr5g019790 1.0kb upstream 1.0kb upstream 4194 true chr5: 7501168-7505361 Medicago truncatula
Medtr5g019790 1.0kb upstream 1.0kb upstream 1000 false chr5: 7504362-7505361 Medicago truncatula
Medtr5g019790 1.0kb downstream 1.0kb downstream 4194 true chr5: 7500168-7504361 Medicago truncatula
Medtr5g019790 1.0kb downstream 1.0kb downstream 1000 false chr5: 7500168-7501167 Medicago truncatula
Medtr5g019790 2.0kb upstream 2.0kb upstream 5194 true chr5: 7501168-7506361 Medicago truncatula
Medtr5g019790 2.0kb upstream 2.0kb upstream 2000 false chr5: 7504362-7506361 Medicago truncatula
Medtr5g019790 2.0kb downstream 2.0kb downstream 5194 true chr5: 7499168-7504361 Medicago truncatula
Medtr5g019790 2.0kb downstream 2.0kb downstream 2000 false chr5: 7499168-7501167 Medicago truncatula
Medtr5g019790 5.0kb upstream 5.0kb upstream 8194 true chr5: 7501168-7509361 Medicago truncatula
Medtr5g019790 5.0kb upstream 5.0kb upstream 5000 false chr5: 7504362-7509361 Medicago truncatula
Medtr5g019790 5.0kb downstream 5.0kb downstream 8194 true chr5: 7496168-7504361 Medicago truncatula
Medtr5g019790 5.0kb downstream 5.0kb downstream 5000 false chr5: 7496168-7501167 Medicago truncatula
Medtr5g019790 10.0kb upstream 10.0kb upstream 13194 true chr5: 7501168-7514361 Medicago truncatula
Medtr5g019790 10.0kb upstream 10.0kb upstream 10000 false chr5: 7504362-7514361 Medicago truncatula
Medtr5g019790 10.0kb downstream 10.0kb downstream 13194 true chr5: 7491168-7504361 Medicago truncatula
Medtr5g019790 10.0kb downstream 10.0kb downstream 10000 false chr5: 7491168-7501167 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314824 5265 Fabidae View MSA
124074928 5270 Rosid View MSA
123743389 5271 Pentapetalae View MSA
122796886 5272 Eudicot View MSA
122043108 5273 Angiosperm View MSA
121351334 5274 Embryophyte View MSA
123428574 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.057        
cufflinks 14.053     High  
cufflinks 14.3     High  
cufflinks 4.427        
cufflinks 24.046     High High
cufflinks 3.487       Low
cufflinks 5.496        
cufflinks 14.087     High  
cufflinks 3.253       Low

0 Strain