Gene : Medtr5g019780 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31189:SF7 - CUPIN FAMILY PROTEIN Description:  cupin family protein
Genomic Order:  1083 Name:  ? Medtr5g019780
Secondary Identifier:  ? PAC:31091523
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g019780 0.5kb upstream 0.5kb upstream 3728 true chr5: 7496591-7500318 Medicago truncatula
Medtr5g019780 0.5kb upstream 0.5kb upstream 500 false chr5: 7496591-7497090 Medicago truncatula
Medtr5g019780 0.5kb downstream 0.5kb downstream 3728 true chr5: 7497091-7500818 Medicago truncatula
Medtr5g019780 0.5kb downstream 0.5kb downstream 500 false chr5: 7500319-7500818 Medicago truncatula
Medtr5g019780 1.0kb upstream 1.0kb upstream 4228 true chr5: 7496091-7500318 Medicago truncatula
Medtr5g019780 1.0kb upstream 1.0kb upstream 1000 false chr5: 7496091-7497090 Medicago truncatula
Medtr5g019780 1.0kb downstream 1.0kb downstream 4228 true chr5: 7497091-7501318 Medicago truncatula
Medtr5g019780 1.0kb downstream 1.0kb downstream 1000 false chr5: 7500319-7501318 Medicago truncatula
Medtr5g019780 2.0kb upstream 2.0kb upstream 5228 true chr5: 7495091-7500318 Medicago truncatula
Medtr5g019780 2.0kb upstream 2.0kb upstream 2000 false chr5: 7495091-7497090 Medicago truncatula
Medtr5g019780 2.0kb downstream 2.0kb downstream 5228 true chr5: 7497091-7502318 Medicago truncatula
Medtr5g019780 2.0kb downstream 2.0kb downstream 2000 false chr5: 7500319-7502318 Medicago truncatula
Medtr5g019780 5.0kb upstream 5.0kb upstream 8228 true chr5: 7492091-7500318 Medicago truncatula
Medtr5g019780 5.0kb upstream 5.0kb upstream 5000 false chr5: 7492091-7497090 Medicago truncatula
Medtr5g019780 5.0kb downstream 5.0kb downstream 8228 true chr5: 7497091-7505318 Medicago truncatula
Medtr5g019780 5.0kb downstream 5.0kb downstream 5000 false chr5: 7500319-7505318 Medicago truncatula
Medtr5g019780 10.0kb upstream 10.0kb upstream 13228 true chr5: 7487091-7500318 Medicago truncatula
Medtr5g019780 10.0kb upstream 10.0kb upstream 10000 false chr5: 7487091-7497090 Medicago truncatula
Medtr5g019780 10.0kb downstream 10.0kb downstream 13228 true chr5: 7497091-7510318 Medicago truncatula
Medtr5g019780 10.0kb downstream 10.0kb downstream 10000 false chr5: 7500319-7510318 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307831 5265 Fabidae View MSA
124064948 5270 Rosid View MSA
123752379 5271 Pentapetalae View MSA
122792319 5272 Eudicot View MSA
122046827 5273 Angiosperm View MSA
121310665 5274 Embryophyte View MSA
123348093 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.011     Low Low
cufflinks 0.08        
cufflinks 0.13       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.101        
cufflinks 0.019     Low  
cufflinks 0.023     Low  
cufflinks 0.123       High
cufflinks 0.023     Low  

0 Strain