Gene : Medtr5g019720 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12300:SF47 - HVA22-LIKE PROTEIN K Description:  TB2/DP1, HVA22 family protein
Genomic Order:  1079 Name:  ? Medtr5g019720
Secondary Identifier:  ? PAC:31088850
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g019720 0.5kb upstream 0.5kb upstream 4462 true chr5: 7474504-7478965 Medicago truncatula
Medtr5g019720 0.5kb upstream 0.5kb upstream 500 false chr5: 7478466-7478965 Medicago truncatula
Medtr5g019720 0.5kb downstream 0.5kb downstream 4462 true chr5: 7474004-7478465 Medicago truncatula
Medtr5g019720 0.5kb downstream 0.5kb downstream 500 false chr5: 7474004-7474503 Medicago truncatula
Medtr5g019720 1.0kb upstream 1.0kb upstream 4962 true chr5: 7474504-7479465 Medicago truncatula
Medtr5g019720 1.0kb upstream 1.0kb upstream 1000 false chr5: 7478466-7479465 Medicago truncatula
Medtr5g019720 1.0kb downstream 1.0kb downstream 4962 true chr5: 7473504-7478465 Medicago truncatula
Medtr5g019720 1.0kb downstream 1.0kb downstream 1000 false chr5: 7473504-7474503 Medicago truncatula
Medtr5g019720 2.0kb upstream 2.0kb upstream 5962 true chr5: 7474504-7480465 Medicago truncatula
Medtr5g019720 2.0kb upstream 2.0kb upstream 2000 false chr5: 7478466-7480465 Medicago truncatula
Medtr5g019720 2.0kb downstream 2.0kb downstream 5962 true chr5: 7472504-7478465 Medicago truncatula
Medtr5g019720 2.0kb downstream 2.0kb downstream 2000 false chr5: 7472504-7474503 Medicago truncatula
Medtr5g019720 5.0kb upstream 5.0kb upstream 8962 true chr5: 7474504-7483465 Medicago truncatula
Medtr5g019720 5.0kb upstream 5.0kb upstream 5000 false chr5: 7478466-7483465 Medicago truncatula
Medtr5g019720 5.0kb downstream 5.0kb downstream 8962 true chr5: 7469504-7478465 Medicago truncatula
Medtr5g019720 5.0kb downstream 5.0kb downstream 5000 false chr5: 7469504-7474503 Medicago truncatula
Medtr5g019720 10.0kb upstream 10.0kb upstream 13962 true chr5: 7474504-7488465 Medicago truncatula
Medtr5g019720 10.0kb upstream 10.0kb upstream 10000 false chr5: 7478466-7488465 Medicago truncatula
Medtr5g019720 10.0kb downstream 10.0kb downstream 13962 true chr5: 7464504-7478465 Medicago truncatula
Medtr5g019720 10.0kb downstream 10.0kb downstream 10000 false chr5: 7464504-7474503 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307036 5265 Fabidae View MSA
124070048 5270 Rosid View MSA
123739293 5271 Pentapetalae View MSA
122793749 5272 Eudicot View MSA
122049785 5273 Angiosperm View MSA
121348295 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.92        
cufflinks 1.826        
cufflinks 2.263        
cufflinks 3.152       High
cufflinks 2.217        
cufflinks 1.952        
cufflinks 2.284        
cufflinks 1.762       Low
cufflinks 2.38        

0 Strain