Gene : Medtr5g019680 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR24326:SF281 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-21-RELATED Description:  homeobox leucine zipper protein
Genomic Order:  1077 Name:  ? Medtr5g019680
Secondary Identifier:  ? PAC:31091889
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g019680 0.5kb upstream 0.5kb upstream 2421 true chr5: 7460141-7462561 Medicago truncatula
Medtr5g019680 0.5kb upstream 0.5kb upstream 500 false chr5: 7460141-7460640 Medicago truncatula
Medtr5g019680 0.5kb downstream 0.5kb downstream 2421 true chr5: 7460641-7463061 Medicago truncatula
Medtr5g019680 0.5kb downstream 0.5kb downstream 500 false chr5: 7462562-7463061 Medicago truncatula
Medtr5g019680 1.0kb upstream 1.0kb upstream 2921 true chr5: 7459641-7462561 Medicago truncatula
Medtr5g019680 1.0kb upstream 1.0kb upstream 1000 false chr5: 7459641-7460640 Medicago truncatula
Medtr5g019680 1.0kb downstream 1.0kb downstream 2921 true chr5: 7460641-7463561 Medicago truncatula
Medtr5g019680 1.0kb downstream 1.0kb downstream 1000 false chr5: 7462562-7463561 Medicago truncatula
Medtr5g019680 2.0kb upstream 2.0kb upstream 3921 true chr5: 7458641-7462561 Medicago truncatula
Medtr5g019680 2.0kb upstream 2.0kb upstream 2000 false chr5: 7458641-7460640 Medicago truncatula
Medtr5g019680 2.0kb downstream 2.0kb downstream 3921 true chr5: 7460641-7464561 Medicago truncatula
Medtr5g019680 2.0kb downstream 2.0kb downstream 2000 false chr5: 7462562-7464561 Medicago truncatula
Medtr5g019680 5.0kb upstream 5.0kb upstream 6921 true chr5: 7455641-7462561 Medicago truncatula
Medtr5g019680 5.0kb upstream 5.0kb upstream 5000 false chr5: 7455641-7460640 Medicago truncatula
Medtr5g019680 5.0kb downstream 5.0kb downstream 6921 true chr5: 7460641-7467561 Medicago truncatula
Medtr5g019680 5.0kb downstream 5.0kb downstream 5000 false chr5: 7462562-7467561 Medicago truncatula
Medtr5g019680 10.0kb upstream 10.0kb upstream 11921 true chr5: 7450641-7462561 Medicago truncatula
Medtr5g019680 10.0kb upstream 10.0kb upstream 10000 false chr5: 7450641-7460640 Medicago truncatula
Medtr5g019680 10.0kb downstream 10.0kb downstream 11921 true chr5: 7460641-7472561 Medicago truncatula
Medtr5g019680 10.0kb downstream 10.0kb downstream 10000 false chr5: 7462562-7472561 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308110 5265 Fabidae View MSA
124061300 5270 Rosid View MSA
123736680 5271 Pentapetalae View MSA
122796133 5272 Eudicot View MSA
122042679 5273 Angiosperm View MSA
121309999 5274 Embryophyte View MSA
123347608 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.697       Low
cufflinks 2.767        
cufflinks 8.274        
cufflinks 8.416        
cufflinks 1.751       Low
cufflinks 6.051        
cufflinks 13.19     High High
cufflinks 6.146        
cufflinks 4.013        

0 Strain