Gene : Medtr5g019650 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR24326:SF281 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-21-RELATED Description:  homeobox leucine zipper protein
Genomic Order:  1076 Name:  ? Medtr5g019650
Secondary Identifier:  ? PAC:31085786
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g019650 0.5kb upstream 0.5kb upstream 2213 true chr5: 7445174-7447386 Medicago truncatula
Medtr5g019650 0.5kb upstream 0.5kb upstream 500 false chr5: 7445174-7445673 Medicago truncatula
Medtr5g019650 0.5kb downstream 0.5kb downstream 2213 true chr5: 7445674-7447886 Medicago truncatula
Medtr5g019650 0.5kb downstream 0.5kb downstream 500 false chr5: 7447387-7447886 Medicago truncatula
Medtr5g019650 1.0kb upstream 1.0kb upstream 2713 true chr5: 7444674-7447386 Medicago truncatula
Medtr5g019650 1.0kb upstream 1.0kb upstream 1000 false chr5: 7444674-7445673 Medicago truncatula
Medtr5g019650 1.0kb downstream 1.0kb downstream 2713 true chr5: 7445674-7448386 Medicago truncatula
Medtr5g019650 1.0kb downstream 1.0kb downstream 1000 false chr5: 7447387-7448386 Medicago truncatula
Medtr5g019650 2.0kb upstream 2.0kb upstream 3713 true chr5: 7443674-7447386 Medicago truncatula
Medtr5g019650 2.0kb upstream 2.0kb upstream 2000 false chr5: 7443674-7445673 Medicago truncatula
Medtr5g019650 2.0kb downstream 2.0kb downstream 3713 true chr5: 7445674-7449386 Medicago truncatula
Medtr5g019650 2.0kb downstream 2.0kb downstream 2000 false chr5: 7447387-7449386 Medicago truncatula
Medtr5g019650 5.0kb upstream 5.0kb upstream 6713 true chr5: 7440674-7447386 Medicago truncatula
Medtr5g019650 5.0kb upstream 5.0kb upstream 5000 false chr5: 7440674-7445673 Medicago truncatula
Medtr5g019650 5.0kb downstream 5.0kb downstream 6713 true chr5: 7445674-7452386 Medicago truncatula
Medtr5g019650 5.0kb downstream 5.0kb downstream 5000 false chr5: 7447387-7452386 Medicago truncatula
Medtr5g019650 10.0kb upstream 10.0kb upstream 11713 true chr5: 7435674-7447386 Medicago truncatula
Medtr5g019650 10.0kb upstream 10.0kb upstream 10000 false chr5: 7435674-7445673 Medicago truncatula
Medtr5g019650 10.0kb downstream 10.0kb downstream 11713 true chr5: 7445674-7457386 Medicago truncatula
Medtr5g019650 10.0kb downstream 10.0kb downstream 10000 false chr5: 7447387-7457386 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308110 5265 Fabidae View MSA
124061300 5270 Rosid View MSA
123736680 5271 Pentapetalae View MSA
122796133 5272 Eudicot View MSA
122042679 5273 Angiosperm View MSA
121309999 5274 Embryophyte View MSA
123347608 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.186       Low
cufflinks 3.524        
cufflinks 4.956        
cufflinks 3.22        
cufflinks 3.596        
cufflinks 2.484        
cufflinks 6.352        
cufflinks 5.082        
cufflinks 2.396        

0 Strain