Gene : Medtr5g019620 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR30546:SF3 - MINOR ALLERGEN Description:  NAD(P)H:quinone oxidoreductase, type IV protein
Genomic Order:  1073 Name:  ? Medtr5g019620
Secondary Identifier:  ? PAC:31085629
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7279 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g019620 0.5kb upstream 0.5kb upstream 4013 true chr5: 7428428-7432440 Medicago truncatula
Medtr5g019620 0.5kb upstream 0.5kb upstream 500 false chr5: 7431941-7432440 Medicago truncatula
Medtr5g019620 0.5kb downstream 0.5kb downstream 4013 true chr5: 7427928-7431940 Medicago truncatula
Medtr5g019620 0.5kb downstream 0.5kb downstream 500 false chr5: 7427928-7428427 Medicago truncatula
Medtr5g019620 1.0kb upstream 1.0kb upstream 4513 true chr5: 7428428-7432940 Medicago truncatula
Medtr5g019620 1.0kb upstream 1.0kb upstream 1000 false chr5: 7431941-7432940 Medicago truncatula
Medtr5g019620 1.0kb downstream 1.0kb downstream 4513 true chr5: 7427428-7431940 Medicago truncatula
Medtr5g019620 1.0kb downstream 1.0kb downstream 1000 false chr5: 7427428-7428427 Medicago truncatula
Medtr5g019620 2.0kb upstream 2.0kb upstream 5513 true chr5: 7428428-7433940 Medicago truncatula
Medtr5g019620 2.0kb upstream 2.0kb upstream 2000 false chr5: 7431941-7433940 Medicago truncatula
Medtr5g019620 2.0kb downstream 2.0kb downstream 5513 true chr5: 7426428-7431940 Medicago truncatula
Medtr5g019620 2.0kb downstream 2.0kb downstream 2000 false chr5: 7426428-7428427 Medicago truncatula
Medtr5g019620 5.0kb upstream 5.0kb upstream 8513 true chr5: 7428428-7436940 Medicago truncatula
Medtr5g019620 5.0kb upstream 5.0kb upstream 5000 false chr5: 7431941-7436940 Medicago truncatula
Medtr5g019620 5.0kb downstream 5.0kb downstream 8513 true chr5: 7423428-7431940 Medicago truncatula
Medtr5g019620 5.0kb downstream 5.0kb downstream 5000 false chr5: 7423428-7428427 Medicago truncatula
Medtr5g019620 10.0kb upstream 10.0kb upstream 13513 true chr5: 7428428-7441940 Medicago truncatula
Medtr5g019620 10.0kb upstream 10.0kb upstream 10000 false chr5: 7431941-7441940 Medicago truncatula
Medtr5g019620 10.0kb downstream 10.0kb downstream 13513 true chr5: 7418428-7431940 Medicago truncatula
Medtr5g019620 10.0kb downstream 10.0kb downstream 10000 false chr5: 7418428-7428427 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313825 5265 Fabidae View MSA
124071872 5270 Rosid View MSA
123747296 5271 Pentapetalae View MSA
122787276 5272 Eudicot View MSA
122042695 5273 Angiosperm View MSA
121346048 5274 Embryophyte View MSA
123428089 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.214       Low
cufflinks 2.147        
cufflinks 1.915        
cufflinks 7.936       High
cufflinks 3.716        
cufflinks 7.38       High
cufflinks 1.972        
cufflinks 1.802        
cufflinks 5.371        

0 Strain