Gene : Medtr5g020580 M. truncatula Mt4.0v1
Defline:  (1 of 9) PTHR16517:SF40 - TUBBY-LIKE F-BOX PROTEIN 11-RELATED Description:  tubby-F-box-like protein
Genomic Order:  1141 Name:  ? Medtr5g020580
Secondary Identifier:  ? PAC:31087968
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g020580 0.5kb upstream 0.5kb upstream 4144 true chr5: 7877714-7881857 Medicago truncatula
Medtr5g020580 0.5kb upstream 0.5kb upstream 500 false chr5: 7881358-7881857 Medicago truncatula
Medtr5g020580 0.5kb downstream 0.5kb downstream 4144 true chr5: 7877214-7881357 Medicago truncatula
Medtr5g020580 0.5kb downstream 0.5kb downstream 500 false chr5: 7877214-7877713 Medicago truncatula
Medtr5g020580 1.0kb upstream 1.0kb upstream 4644 true chr5: 7877714-7882357 Medicago truncatula
Medtr5g020580 1.0kb upstream 1.0kb upstream 1000 false chr5: 7881358-7882357 Medicago truncatula
Medtr5g020580 1.0kb downstream 1.0kb downstream 4644 true chr5: 7876714-7881357 Medicago truncatula
Medtr5g020580 1.0kb downstream 1.0kb downstream 1000 false chr5: 7876714-7877713 Medicago truncatula
Medtr5g020580 2.0kb upstream 2.0kb upstream 5644 true chr5: 7877714-7883357 Medicago truncatula
Medtr5g020580 2.0kb upstream 2.0kb upstream 2000 false chr5: 7881358-7883357 Medicago truncatula
Medtr5g020580 2.0kb downstream 2.0kb downstream 5644 true chr5: 7875714-7881357 Medicago truncatula
Medtr5g020580 2.0kb downstream 2.0kb downstream 2000 false chr5: 7875714-7877713 Medicago truncatula
Medtr5g020580 5.0kb upstream 5.0kb upstream 8644 true chr5: 7877714-7886357 Medicago truncatula
Medtr5g020580 5.0kb upstream 5.0kb upstream 5000 false chr5: 7881358-7886357 Medicago truncatula
Medtr5g020580 5.0kb downstream 5.0kb downstream 8644 true chr5: 7872714-7881357 Medicago truncatula
Medtr5g020580 5.0kb downstream 5.0kb downstream 5000 false chr5: 7872714-7877713 Medicago truncatula
Medtr5g020580 10.0kb upstream 10.0kb upstream 13644 true chr5: 7877714-7891357 Medicago truncatula
Medtr5g020580 10.0kb upstream 10.0kb upstream 10000 false chr5: 7881358-7891357 Medicago truncatula
Medtr5g020580 10.0kb downstream 10.0kb downstream 13644 true chr5: 7867714-7881357 Medicago truncatula
Medtr5g020580 10.0kb downstream 10.0kb downstream 10000 false chr5: 7867714-7877713 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311486 5265 Fabidae View MSA
124064248 5270 Rosid View MSA
123747341 5271 Pentapetalae View MSA
122790799 5272 Eudicot View MSA
122049170 5273 Angiosperm View MSA
123429062 5275 Viridiplantae View MSA
121348967 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.548     High  
cufflinks 15.755     High  
cufflinks 26.427     High  
cufflinks 39.903     High High
cufflinks 16.437     High  
cufflinks 15.833     High  
cufflinks 23.99     High  
cufflinks 18.155     High  
cufflinks 19.844     High  

0 Strain