Gene : Medtr5g020430 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR13989 - REPLICATION PROTEIN A-RELATED Description:  OB-fold nucleic acid-binding domain protein
Genomic Order:  1131 Name:  ? Medtr5g020430
Secondary Identifier:  ? PAC:31088380
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g020430 0.5kb upstream 0.5kb upstream 1301 true chr5: 7800741-7802041 Medicago truncatula
Medtr5g020430 0.5kb upstream 0.5kb upstream 500 false chr5: 7800741-7801240 Medicago truncatula
Medtr5g020430 0.5kb downstream 0.5kb downstream 1301 true chr5: 7801241-7802541 Medicago truncatula
Medtr5g020430 0.5kb downstream 0.5kb downstream 500 false chr5: 7802042-7802541 Medicago truncatula
Medtr5g020430 1.0kb upstream 1.0kb upstream 1801 true chr5: 7800241-7802041 Medicago truncatula
Medtr5g020430 1.0kb upstream 1.0kb upstream 1000 false chr5: 7800241-7801240 Medicago truncatula
Medtr5g020430 1.0kb downstream 1.0kb downstream 1801 true chr5: 7801241-7803041 Medicago truncatula
Medtr5g020430 1.0kb downstream 1.0kb downstream 1000 false chr5: 7802042-7803041 Medicago truncatula
Medtr5g020430 2.0kb upstream 2.0kb upstream 2801 true chr5: 7799241-7802041 Medicago truncatula
Medtr5g020430 2.0kb upstream 2.0kb upstream 2000 false chr5: 7799241-7801240 Medicago truncatula
Medtr5g020430 2.0kb downstream 2.0kb downstream 2801 true chr5: 7801241-7804041 Medicago truncatula
Medtr5g020430 2.0kb downstream 2.0kb downstream 2000 false chr5: 7802042-7804041 Medicago truncatula
Medtr5g020430 5.0kb upstream 5.0kb upstream 5801 true chr5: 7796241-7802041 Medicago truncatula
Medtr5g020430 5.0kb upstream 5.0kb upstream 5000 false chr5: 7796241-7801240 Medicago truncatula
Medtr5g020430 5.0kb downstream 5.0kb downstream 5801 true chr5: 7801241-7807041 Medicago truncatula
Medtr5g020430 5.0kb downstream 5.0kb downstream 5000 false chr5: 7802042-7807041 Medicago truncatula
Medtr5g020430 10.0kb upstream 10.0kb upstream 10801 true chr5: 7791241-7802041 Medicago truncatula
Medtr5g020430 10.0kb upstream 10.0kb upstream 10000 false chr5: 7791241-7801240 Medicago truncatula
Medtr5g020430 10.0kb downstream 10.0kb downstream 10801 true chr5: 7801241-7812041 Medicago truncatula
Medtr5g020430 10.0kb downstream 10.0kb downstream 10000 false chr5: 7802042-7812041 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312483 5265 Fabidae View MSA
124067741 5270 Rosid View MSA
123737175 5271 Pentapetalae View MSA
122786413 5272 Eudicot View MSA
122044102 5273 Angiosperm View MSA
121345132 5274 Embryophyte View MSA
123425190 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.235       Low
cufflinks 1.597        
cufflinks 1.237        
cufflinks 1.978        
cufflinks 2.148        
cufflinks 1.863        
cufflinks 0.441       Low
cufflinks 1.278        
cufflinks 1.105        

0 Strain