Gene : Medtr5g020530 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23075:SF3 - AAA-TYPE ATPASE FAMILY PROTEIN-RELATED Description:  P-loop nucleoside triphosphate hydrolase superfamily protein
Genomic Order:  1137 Name:  ? Medtr5g020530
Secondary Identifier:  ? PAC:31087767
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g020530 0.5kb upstream 0.5kb upstream 7748 true chr5: 7847254-7855001 Medicago truncatula
Medtr5g020530 0.5kb upstream 0.5kb upstream 500 false chr5: 7854502-7855001 Medicago truncatula
Medtr5g020530 0.5kb downstream 0.5kb downstream 7748 true chr5: 7846754-7854501 Medicago truncatula
Medtr5g020530 0.5kb downstream 0.5kb downstream 500 false chr5: 7846754-7847253 Medicago truncatula
Medtr5g020530 1.0kb upstream 1.0kb upstream 8248 true chr5: 7847254-7855501 Medicago truncatula
Medtr5g020530 1.0kb upstream 1.0kb upstream 1000 false chr5: 7854502-7855501 Medicago truncatula
Medtr5g020530 1.0kb downstream 1.0kb downstream 8248 true chr5: 7846254-7854501 Medicago truncatula
Medtr5g020530 1.0kb downstream 1.0kb downstream 1000 false chr5: 7846254-7847253 Medicago truncatula
Medtr5g020530 2.0kb upstream 2.0kb upstream 9248 true chr5: 7847254-7856501 Medicago truncatula
Medtr5g020530 2.0kb upstream 2.0kb upstream 2000 false chr5: 7854502-7856501 Medicago truncatula
Medtr5g020530 2.0kb downstream 2.0kb downstream 9248 true chr5: 7845254-7854501 Medicago truncatula
Medtr5g020530 2.0kb downstream 2.0kb downstream 2000 false chr5: 7845254-7847253 Medicago truncatula
Medtr5g020530 5.0kb upstream 5.0kb upstream 12248 true chr5: 7847254-7859501 Medicago truncatula
Medtr5g020530 5.0kb upstream 5.0kb upstream 5000 false chr5: 7854502-7859501 Medicago truncatula
Medtr5g020530 5.0kb downstream 5.0kb downstream 12248 true chr5: 7842254-7854501 Medicago truncatula
Medtr5g020530 5.0kb downstream 5.0kb downstream 5000 false chr5: 7842254-7847253 Medicago truncatula
Medtr5g020530 10.0kb upstream 10.0kb upstream 17248 true chr5: 7847254-7864501 Medicago truncatula
Medtr5g020530 10.0kb upstream 10.0kb upstream 10000 false chr5: 7854502-7864501 Medicago truncatula
Medtr5g020530 10.0kb downstream 10.0kb downstream 17248 true chr5: 7837254-7854501 Medicago truncatula
Medtr5g020530 10.0kb downstream 10.0kb downstream 10000 false chr5: 7837254-7847253 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308293 5265 Fabidae View MSA
124067712 5270 Rosid View MSA
123739044 5271 Pentapetalae View MSA
122789244 5272 Eudicot View MSA
122051121 5273 Angiosperm View MSA
121347220 5274 Embryophyte View MSA
123424543 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.159       High
cufflinks 2.006        
cufflinks 2.197        
cufflinks 0.865       Low
cufflinks 5.649       High
cufflinks 0.702       Low
cufflinks 2.25        
cufflinks 2.603        
cufflinks 2.071        

0 Strain