Gene : Medtr5g020190 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR17972 - NUCLEOLAR RNA-ASSOCIATED PROTEIN Description:  nucleolar RNA-associated protein, putative
Genomic Order:  1115 Name:  ? Medtr5g020190
Secondary Identifier:  ? PAC:31087353
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g020190 0.5kb upstream 0.5kb upstream 8907 true chr5: 7698408-7707314 Medicago truncatula
Medtr5g020190 0.5kb upstream 0.5kb upstream 500 false chr5: 7706815-7707314 Medicago truncatula
Medtr5g020190 0.5kb downstream 0.5kb downstream 8907 true chr5: 7697908-7706814 Medicago truncatula
Medtr5g020190 0.5kb downstream 0.5kb downstream 500 false chr5: 7697908-7698407 Medicago truncatula
Medtr5g020190 1.0kb upstream 1.0kb upstream 9407 true chr5: 7698408-7707814 Medicago truncatula
Medtr5g020190 1.0kb upstream 1.0kb upstream 1000 false chr5: 7706815-7707814 Medicago truncatula
Medtr5g020190 1.0kb downstream 1.0kb downstream 9407 true chr5: 7697408-7706814 Medicago truncatula
Medtr5g020190 1.0kb downstream 1.0kb downstream 1000 false chr5: 7697408-7698407 Medicago truncatula
Medtr5g020190 2.0kb upstream 2.0kb upstream 10407 true chr5: 7698408-7708814 Medicago truncatula
Medtr5g020190 2.0kb upstream 2.0kb upstream 2000 false chr5: 7706815-7708814 Medicago truncatula
Medtr5g020190 2.0kb downstream 2.0kb downstream 10407 true chr5: 7696408-7706814 Medicago truncatula
Medtr5g020190 2.0kb downstream 2.0kb downstream 2000 false chr5: 7696408-7698407 Medicago truncatula
Medtr5g020190 5.0kb upstream 5.0kb upstream 13407 true chr5: 7698408-7711814 Medicago truncatula
Medtr5g020190 5.0kb upstream 5.0kb upstream 5000 false chr5: 7706815-7711814 Medicago truncatula
Medtr5g020190 5.0kb downstream 5.0kb downstream 13407 true chr5: 7693408-7706814 Medicago truncatula
Medtr5g020190 5.0kb downstream 5.0kb downstream 5000 false chr5: 7693408-7698407 Medicago truncatula
Medtr5g020190 10.0kb upstream 10.0kb upstream 18407 true chr5: 7698408-7716814 Medicago truncatula
Medtr5g020190 10.0kb upstream 10.0kb upstream 10000 false chr5: 7706815-7716814 Medicago truncatula
Medtr5g020190 10.0kb downstream 10.0kb downstream 18407 true chr5: 7688408-7706814 Medicago truncatula
Medtr5g020190 10.0kb downstream 10.0kb downstream 10000 false chr5: 7688408-7698407 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303331 5265 Fabidae View MSA
124066124 5270 Rosid View MSA
123740868 5271 Pentapetalae View MSA
122787151 5272 Eudicot View MSA
122046493 5273 Angiosperm View MSA
121346121 5274 Embryophyte View MSA
123425222 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.897        
cufflinks 2.35        
cufflinks 3.119        
cufflinks 0.879       Low
cufflinks 4.495       High
cufflinks 0.636       Low
cufflinks 1.392        
cufflinks 2.378        
cufflinks 1.323        

0 Strain