Gene : Medtr5g026280 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12121:SF42 - CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 4-RELATED Description:  carbon catabolite repressor-like protein
Genomic Order:  1563 Name:  ? Medtr5g026280
Secondary Identifier:  ? PAC:31085757
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g026280 0.5kb upstream 0.5kb upstream 5210 true chr5: 10803881-10809090 Medicago truncatula
Medtr5g026280 0.5kb upstream 0.5kb upstream 500 false chr5: 10803881-10804380 Medicago truncatula
Medtr5g026280 0.5kb downstream 0.5kb downstream 5210 true chr5: 10804381-10809590 Medicago truncatula
Medtr5g026280 0.5kb downstream 0.5kb downstream 500 false chr5: 10809091-10809590 Medicago truncatula
Medtr5g026280 1.0kb upstream 1.0kb upstream 5710 true chr5: 10803381-10809090 Medicago truncatula
Medtr5g026280 1.0kb upstream 1.0kb upstream 1000 false chr5: 10803381-10804380 Medicago truncatula
Medtr5g026280 1.0kb downstream 1.0kb downstream 5710 true chr5: 10804381-10810090 Medicago truncatula
Medtr5g026280 1.0kb downstream 1.0kb downstream 1000 false chr5: 10809091-10810090 Medicago truncatula
Medtr5g026280 2.0kb upstream 2.0kb upstream 6710 true chr5: 10802381-10809090 Medicago truncatula
Medtr5g026280 2.0kb upstream 2.0kb upstream 2000 false chr5: 10802381-10804380 Medicago truncatula
Medtr5g026280 2.0kb downstream 2.0kb downstream 6710 true chr5: 10804381-10811090 Medicago truncatula
Medtr5g026280 2.0kb downstream 2.0kb downstream 2000 false chr5: 10809091-10811090 Medicago truncatula
Medtr5g026280 5.0kb upstream 5.0kb upstream 9710 true chr5: 10799381-10809090 Medicago truncatula
Medtr5g026280 5.0kb upstream 5.0kb upstream 5000 false chr5: 10799381-10804380 Medicago truncatula
Medtr5g026280 5.0kb downstream 5.0kb downstream 9710 true chr5: 10804381-10814090 Medicago truncatula
Medtr5g026280 5.0kb downstream 5.0kb downstream 5000 false chr5: 10809091-10814090 Medicago truncatula
Medtr5g026280 10.0kb upstream 10.0kb upstream 14710 true chr5: 10794381-10809090 Medicago truncatula
Medtr5g026280 10.0kb upstream 10.0kb upstream 10000 false chr5: 10794381-10804380 Medicago truncatula
Medtr5g026280 10.0kb downstream 10.0kb downstream 14710 true chr5: 10804381-10819090 Medicago truncatula
Medtr5g026280 10.0kb downstream 10.0kb downstream 10000 false chr5: 10809091-10819090 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299539 5265 Fabidae View MSA
124063704 5270 Rosid View MSA
123740747 5271 Pentapetalae View MSA
122787902 5272 Eudicot View MSA
122047277 5273 Angiosperm View MSA
121350616 5274 Embryophyte View MSA
123428031 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.301       Low
cufflinks 0.575        
cufflinks 0.455        
cufflinks 0.847       High
cufflinks 1.267       High
cufflinks 0.358        
cufflinks 0.494        
cufflinks 0.417        
cufflinks 0.35        

0 Strain