Gene : Medtr5g026660 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13900 - TRANSCRIPTION INITIATION FACTOR TFIID Description:  transcription initiation factor TFIID protein, putative
Genomic Order:  1595 Name:  ? Medtr5g026660
Secondary Identifier:  ? PAC:31091162
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g026660 0.5kb upstream 0.5kb upstream 21092 true chr5: 10995785-11016876 Medicago truncatula
Medtr5g026660 0.5kb upstream 0.5kb upstream 500 false chr5: 11016377-11016876 Medicago truncatula
Medtr5g026660 0.5kb downstream 0.5kb downstream 21092 true chr5: 10995285-11016376 Medicago truncatula
Medtr5g026660 0.5kb downstream 0.5kb downstream 500 false chr5: 10995285-10995784 Medicago truncatula
Medtr5g026660 1.0kb upstream 1.0kb upstream 21592 true chr5: 10995785-11017376 Medicago truncatula
Medtr5g026660 1.0kb upstream 1.0kb upstream 1000 false chr5: 11016377-11017376 Medicago truncatula
Medtr5g026660 1.0kb downstream 1.0kb downstream 21592 true chr5: 10994785-11016376 Medicago truncatula
Medtr5g026660 1.0kb downstream 1.0kb downstream 1000 false chr5: 10994785-10995784 Medicago truncatula
Medtr5g026660 2.0kb upstream 2.0kb upstream 22592 true chr5: 10995785-11018376 Medicago truncatula
Medtr5g026660 2.0kb upstream 2.0kb upstream 2000 false chr5: 11016377-11018376 Medicago truncatula
Medtr5g026660 2.0kb downstream 2.0kb downstream 22592 true chr5: 10993785-11016376 Medicago truncatula
Medtr5g026660 2.0kb downstream 2.0kb downstream 2000 false chr5: 10993785-10995784 Medicago truncatula
Medtr5g026660 5.0kb upstream 5.0kb upstream 25592 true chr5: 10995785-11021376 Medicago truncatula
Medtr5g026660 5.0kb upstream 5.0kb upstream 5000 false chr5: 11016377-11021376 Medicago truncatula
Medtr5g026660 5.0kb downstream 5.0kb downstream 25592 true chr5: 10990785-11016376 Medicago truncatula
Medtr5g026660 5.0kb downstream 5.0kb downstream 5000 false chr5: 10990785-10995784 Medicago truncatula
Medtr5g026660 10.0kb upstream 10.0kb upstream 30592 true chr5: 10995785-11026376 Medicago truncatula
Medtr5g026660 10.0kb upstream 10.0kb upstream 10000 false chr5: 11016377-11026376 Medicago truncatula
Medtr5g026660 10.0kb downstream 10.0kb downstream 30592 true chr5: 10985785-11016376 Medicago truncatula
Medtr5g026660 10.0kb downstream 10.0kb downstream 10000 false chr5: 10985785-10995784 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302609 5265 Fabidae View MSA
124067609 5270 Rosid View MSA
123748970 5271 Pentapetalae View MSA
122794337 5272 Eudicot View MSA
122046359 5273 Angiosperm View MSA
121347140 5274 Embryophyte View MSA
123423919 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.124        
cufflinks 3.467        
cufflinks 3.655        
cufflinks 0.552       Low
cufflinks 4.04       High
cufflinks 0.905        
cufflinks 1.447        
cufflinks 2.97        
cufflinks 0.916        

0 Strain