Gene : Medtr5g027440 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31499:SF5 - HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN Description:  myb-like transcription factor family protein
Genomic Order:  1643 Name:  ? Medtr5g027440
Secondary Identifier:  ? PAC:31086756
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g027440 0.5kb upstream 0.5kb upstream 3630 true chr5: 11404836-11408465 Medicago truncatula
Medtr5g027440 0.5kb upstream 0.5kb upstream 500 false chr5: 11407966-11408465 Medicago truncatula
Medtr5g027440 0.5kb downstream 0.5kb downstream 3630 true chr5: 11404336-11407965 Medicago truncatula
Medtr5g027440 0.5kb downstream 0.5kb downstream 500 false chr5: 11404336-11404835 Medicago truncatula
Medtr5g027440 1.0kb upstream 1.0kb upstream 4130 true chr5: 11404836-11408965 Medicago truncatula
Medtr5g027440 1.0kb upstream 1.0kb upstream 1000 false chr5: 11407966-11408965 Medicago truncatula
Medtr5g027440 1.0kb downstream 1.0kb downstream 4130 true chr5: 11403836-11407965 Medicago truncatula
Medtr5g027440 1.0kb downstream 1.0kb downstream 1000 false chr5: 11403836-11404835 Medicago truncatula
Medtr5g027440 2.0kb upstream 2.0kb upstream 5130 true chr5: 11404836-11409965 Medicago truncatula
Medtr5g027440 2.0kb upstream 2.0kb upstream 2000 false chr5: 11407966-11409965 Medicago truncatula
Medtr5g027440 2.0kb downstream 2.0kb downstream 5130 true chr5: 11402836-11407965 Medicago truncatula
Medtr5g027440 2.0kb downstream 2.0kb downstream 2000 false chr5: 11402836-11404835 Medicago truncatula
Medtr5g027440 5.0kb upstream 5.0kb upstream 8130 true chr5: 11404836-11412965 Medicago truncatula
Medtr5g027440 5.0kb upstream 5.0kb upstream 5000 false chr5: 11407966-11412965 Medicago truncatula
Medtr5g027440 5.0kb downstream 5.0kb downstream 8130 true chr5: 11399836-11407965 Medicago truncatula
Medtr5g027440 5.0kb downstream 5.0kb downstream 5000 false chr5: 11399836-11404835 Medicago truncatula
Medtr5g027440 10.0kb upstream 10.0kb upstream 13130 true chr5: 11404836-11417965 Medicago truncatula
Medtr5g027440 10.0kb upstream 10.0kb upstream 10000 false chr5: 11407966-11417965 Medicago truncatula
Medtr5g027440 10.0kb downstream 10.0kb downstream 13130 true chr5: 11394836-11407965 Medicago truncatula
Medtr5g027440 10.0kb downstream 10.0kb downstream 10000 false chr5: 11394836-11404835 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307698 5265 Fabidae View MSA
124073439 5270 Rosid View MSA
123741048 5271 Pentapetalae View MSA
122787904 5272 Eudicot View MSA
122042666 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349639 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.623       High
cufflinks 0.059     Low  
cufflinks 0.043     Low  
cufflinks 0.253        
cufflinks 0.029     Low  
cufflinks 0.684        
cufflinks 0.785        
cufflinks 0.021     Low Low
cufflinks 0.293        

0 Strain