Gene : Medtr5g027010 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF11947 - Protein of unknown function (DUF3464) (DUF3464) Description:  transmembrane protein, putative
Genomic Order:  1618 Name:  ? Medtr5g027010
Secondary Identifier:  ? PAC:31089745
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g027010 0.5kb upstream 0.5kb upstream 1348 true chr5: 11190213-11191560 Medicago truncatula
Medtr5g027010 0.5kb upstream 0.5kb upstream 500 false chr5: 11191061-11191560 Medicago truncatula
Medtr5g027010 0.5kb downstream 0.5kb downstream 1348 true chr5: 11189713-11191060 Medicago truncatula
Medtr5g027010 0.5kb downstream 0.5kb downstream 500 false chr5: 11189713-11190212 Medicago truncatula
Medtr5g027010 1.0kb upstream 1.0kb upstream 1848 true chr5: 11190213-11192060 Medicago truncatula
Medtr5g027010 1.0kb upstream 1.0kb upstream 1000 false chr5: 11191061-11192060 Medicago truncatula
Medtr5g027010 1.0kb downstream 1.0kb downstream 1848 true chr5: 11189213-11191060 Medicago truncatula
Medtr5g027010 1.0kb downstream 1.0kb downstream 1000 false chr5: 11189213-11190212 Medicago truncatula
Medtr5g027010 2.0kb upstream 2.0kb upstream 2848 true chr5: 11190213-11193060 Medicago truncatula
Medtr5g027010 2.0kb upstream 2.0kb upstream 2000 false chr5: 11191061-11193060 Medicago truncatula
Medtr5g027010 2.0kb downstream 2.0kb downstream 2848 true chr5: 11188213-11191060 Medicago truncatula
Medtr5g027010 2.0kb downstream 2.0kb downstream 2000 false chr5: 11188213-11190212 Medicago truncatula
Medtr5g027010 5.0kb upstream 5.0kb upstream 5848 true chr5: 11190213-11196060 Medicago truncatula
Medtr5g027010 5.0kb upstream 5.0kb upstream 5000 false chr5: 11191061-11196060 Medicago truncatula
Medtr5g027010 5.0kb downstream 5.0kb downstream 5848 true chr5: 11185213-11191060 Medicago truncatula
Medtr5g027010 5.0kb downstream 5.0kb downstream 5000 false chr5: 11185213-11190212 Medicago truncatula
Medtr5g027010 10.0kb upstream 10.0kb upstream 10848 true chr5: 11190213-11201060 Medicago truncatula
Medtr5g027010 10.0kb upstream 10.0kb upstream 10000 false chr5: 11191061-11201060 Medicago truncatula
Medtr5g027010 10.0kb downstream 10.0kb downstream 10848 true chr5: 11180213-11191060 Medicago truncatula
Medtr5g027010 10.0kb downstream 10.0kb downstream 10000 false chr5: 11180213-11190212 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304779 5265 Fabidae View MSA
124067911 5270 Rosid View MSA
123738639 5271 Pentapetalae View MSA
122792645 5272 Eudicot View MSA
122046649 5273 Angiosperm View MSA
121348094 5274 Embryophyte View MSA
123428537 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.025     Low Low
cufflinks 33.564     High  
cufflinks 40.495     High  
cufflinks 0.137        
cufflinks 80.668     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.275        
cufflinks 49.774     High  
cufflinks 0.208        

0 Strain