Gene : Medtr5g027180 M. truncatula Mt4.0v1
Defline:  (1 of 13) PTHR16007 - EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED Description:  transmembrane 45B-like protein
Genomic Order:  1629 Name:  ? Medtr5g027180
Secondary Identifier:  ? PAC:31086163
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g027180 0.5kb upstream 0.5kb upstream 4492 true chr5: 11267763-11272254 Medicago truncatula
Medtr5g027180 0.5kb upstream 0.5kb upstream 500 false chr5: 11271755-11272254 Medicago truncatula
Medtr5g027180 0.5kb downstream 0.5kb downstream 4492 true chr5: 11267263-11271754 Medicago truncatula
Medtr5g027180 0.5kb downstream 0.5kb downstream 500 false chr5: 11267263-11267762 Medicago truncatula
Medtr5g027180 1.0kb upstream 1.0kb upstream 4992 true chr5: 11267763-11272754 Medicago truncatula
Medtr5g027180 1.0kb upstream 1.0kb upstream 1000 false chr5: 11271755-11272754 Medicago truncatula
Medtr5g027180 1.0kb downstream 1.0kb downstream 4992 true chr5: 11266763-11271754 Medicago truncatula
Medtr5g027180 1.0kb downstream 1.0kb downstream 1000 false chr5: 11266763-11267762 Medicago truncatula
Medtr5g027180 2.0kb upstream 2.0kb upstream 5992 true chr5: 11267763-11273754 Medicago truncatula
Medtr5g027180 2.0kb upstream 2.0kb upstream 2000 false chr5: 11271755-11273754 Medicago truncatula
Medtr5g027180 2.0kb downstream 2.0kb downstream 5992 true chr5: 11265763-11271754 Medicago truncatula
Medtr5g027180 2.0kb downstream 2.0kb downstream 2000 false chr5: 11265763-11267762 Medicago truncatula
Medtr5g027180 5.0kb upstream 5.0kb upstream 8992 true chr5: 11267763-11276754 Medicago truncatula
Medtr5g027180 5.0kb upstream 5.0kb upstream 5000 false chr5: 11271755-11276754 Medicago truncatula
Medtr5g027180 5.0kb downstream 5.0kb downstream 8992 true chr5: 11262763-11271754 Medicago truncatula
Medtr5g027180 5.0kb downstream 5.0kb downstream 5000 false chr5: 11262763-11267762 Medicago truncatula
Medtr5g027180 10.0kb upstream 10.0kb upstream 13992 true chr5: 11267763-11281754 Medicago truncatula
Medtr5g027180 10.0kb upstream 10.0kb upstream 10000 false chr5: 11271755-11281754 Medicago truncatula
Medtr5g027180 10.0kb downstream 10.0kb downstream 13992 true chr5: 11257763-11271754 Medicago truncatula
Medtr5g027180 10.0kb downstream 10.0kb downstream 10000 false chr5: 11257763-11267762 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299440 5265 Fabidae View MSA
124050453 5270 Rosid View MSA
123737519 5271 Pentapetalae View MSA
122787957 5272 Eudicot View MSA
122047488 5273 Angiosperm View MSA
121350277 5274 Embryophyte View MSA
123426219 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.254     High High
cufflinks 1.623       Low
cufflinks 3.83        
cufflinks 7.104        
cufflinks 3.073        
cufflinks 4.012        
cufflinks 11.401     High High
cufflinks 2.508        
cufflinks 8.795        

0 Strain