Gene : Medtr5g026780 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11785:SF338 - POLYAMINE TRANSPORTER RMV1 Description:  neutral amino acid transporter
Genomic Order:  1604 Name:  ? Medtr5g026780
Secondary Identifier:  ? PAC:31087262
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g026780 0.5kb upstream 0.5kb upstream 3214 true chr5: 11053114-11056327 Medicago truncatula
Medtr5g026780 0.5kb upstream 0.5kb upstream 500 false chr5: 11053114-11053613 Medicago truncatula
Medtr5g026780 0.5kb downstream 0.5kb downstream 3214 true chr5: 11053614-11056827 Medicago truncatula
Medtr5g026780 0.5kb downstream 0.5kb downstream 500 false chr5: 11056328-11056827 Medicago truncatula
Medtr5g026780 1.0kb upstream 1.0kb upstream 3714 true chr5: 11052614-11056327 Medicago truncatula
Medtr5g026780 1.0kb upstream 1.0kb upstream 1000 false chr5: 11052614-11053613 Medicago truncatula
Medtr5g026780 1.0kb downstream 1.0kb downstream 3714 true chr5: 11053614-11057327 Medicago truncatula
Medtr5g026780 1.0kb downstream 1.0kb downstream 1000 false chr5: 11056328-11057327 Medicago truncatula
Medtr5g026780 2.0kb upstream 2.0kb upstream 4714 true chr5: 11051614-11056327 Medicago truncatula
Medtr5g026780 2.0kb upstream 2.0kb upstream 2000 false chr5: 11051614-11053613 Medicago truncatula
Medtr5g026780 2.0kb downstream 2.0kb downstream 4714 true chr5: 11053614-11058327 Medicago truncatula
Medtr5g026780 2.0kb downstream 2.0kb downstream 2000 false chr5: 11056328-11058327 Medicago truncatula
Medtr5g026780 5.0kb upstream 5.0kb upstream 7714 true chr5: 11048614-11056327 Medicago truncatula
Medtr5g026780 5.0kb upstream 5.0kb upstream 5000 false chr5: 11048614-11053613 Medicago truncatula
Medtr5g026780 5.0kb downstream 5.0kb downstream 7714 true chr5: 11053614-11061327 Medicago truncatula
Medtr5g026780 5.0kb downstream 5.0kb downstream 5000 false chr5: 11056328-11061327 Medicago truncatula
Medtr5g026780 10.0kb upstream 10.0kb upstream 12714 true chr5: 11043614-11056327 Medicago truncatula
Medtr5g026780 10.0kb upstream 10.0kb upstream 10000 false chr5: 11043614-11053613 Medicago truncatula
Medtr5g026780 10.0kb downstream 10.0kb downstream 12714 true chr5: 11053614-11066327 Medicago truncatula
Medtr5g026780 10.0kb downstream 10.0kb downstream 10000 false chr5: 11056328-11066327 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301788 5265 Fabidae View MSA
124069812 5270 Rosid View MSA
123742789 5271 Pentapetalae View MSA
122791655 5272 Eudicot View MSA
122043396 5273 Angiosperm View MSA
121345389 5274 Embryophyte View MSA
123424636 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.701        
cufflinks 9.034        
cufflinks 10.4     High  
cufflinks 8.469        
cufflinks 10.05        
cufflinks 3.552       Low
cufflinks 7.034        
cufflinks 8.37        
cufflinks 11.998     High High

0 Strain