Gene : Medtr5g025280 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11782:SF3 - APYRASE 7-RELATED Description:  GDA1/CD39 nucleoside phosphatase family protein
Genomic Order:  1486 Name:  ? Medtr5g025280
Secondary Identifier:  ? PAC:31088547
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6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6545 Medicago truncatula pathologic  
Mtruncatula PWY-7177 Medicago truncatula pathologic  
Mtruncatula PWY-7184 Medicago truncatula pathologic  
Mtruncatula PWY-7185 Medicago truncatula pathologic  
Mtruncatula PWY-7210 Medicago truncatula pathologic  
Mtruncatula PWY-7211 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g025280 0.5kb upstream 0.5kb upstream 4832 true chr5: 10257448-10262279 Medicago truncatula
Medtr5g025280 0.5kb upstream 0.5kb upstream 500 false chr5: 10261780-10262279 Medicago truncatula
Medtr5g025280 0.5kb downstream 0.5kb downstream 4832 true chr5: 10256948-10261779 Medicago truncatula
Medtr5g025280 0.5kb downstream 0.5kb downstream 500 false chr5: 10256948-10257447 Medicago truncatula
Medtr5g025280 1.0kb upstream 1.0kb upstream 5332 true chr5: 10257448-10262779 Medicago truncatula
Medtr5g025280 1.0kb upstream 1.0kb upstream 1000 false chr5: 10261780-10262779 Medicago truncatula
Medtr5g025280 1.0kb downstream 1.0kb downstream 5332 true chr5: 10256448-10261779 Medicago truncatula
Medtr5g025280 1.0kb downstream 1.0kb downstream 1000 false chr5: 10256448-10257447 Medicago truncatula
Medtr5g025280 2.0kb upstream 2.0kb upstream 6332 true chr5: 10257448-10263779 Medicago truncatula
Medtr5g025280 2.0kb upstream 2.0kb upstream 2000 false chr5: 10261780-10263779 Medicago truncatula
Medtr5g025280 2.0kb downstream 2.0kb downstream 6332 true chr5: 10255448-10261779 Medicago truncatula
Medtr5g025280 2.0kb downstream 2.0kb downstream 2000 false chr5: 10255448-10257447 Medicago truncatula
Medtr5g025280 5.0kb upstream 5.0kb upstream 9332 true chr5: 10257448-10266779 Medicago truncatula
Medtr5g025280 5.0kb upstream 5.0kb upstream 5000 false chr5: 10261780-10266779 Medicago truncatula
Medtr5g025280 5.0kb downstream 5.0kb downstream 9332 true chr5: 10252448-10261779 Medicago truncatula
Medtr5g025280 5.0kb downstream 5.0kb downstream 5000 false chr5: 10252448-10257447 Medicago truncatula
Medtr5g025280 10.0kb upstream 10.0kb upstream 14332 true chr5: 10257448-10271779 Medicago truncatula
Medtr5g025280 10.0kb upstream 10.0kb upstream 10000 false chr5: 10261780-10271779 Medicago truncatula
Medtr5g025280 10.0kb downstream 10.0kb downstream 14332 true chr5: 10247448-10261779 Medicago truncatula
Medtr5g025280 10.0kb downstream 10.0kb downstream 10000 false chr5: 10247448-10257447 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310197 5265 Fabidae View MSA
124066338 5270 Rosid View MSA
123737585 5271 Pentapetalae View MSA
122786265 5272 Eudicot View MSA
122042120 5273 Angiosperm View MSA
121349143 5274 Embryophyte View MSA
123426899 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.148        
cufflinks 2.033        
cufflinks 1.852        
cufflinks 0.835       Low
cufflinks 2.72       High
cufflinks 1.443        
cufflinks 1.415        
cufflinks 1.363        
cufflinks 1.335        

0 Strain