Gene : Medtr5g023660 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR10629:SF30 - DNA (CYTOSINE-5)-METHYLTRANSFERASE CMT1-RELATED Description:  DNA (cytosine-5)-methyltransferase CMT3-like protein
Genomic Order:  1363 Name:  ? Medtr5g023660
Secondary Identifier:  ? PAC:31087538
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g023660 0.5kb upstream 0.5kb upstream 6662 true chr5: 9389043-9395704 Medicago truncatula
Medtr5g023660 0.5kb upstream 0.5kb upstream 500 false chr5: 9395205-9395704 Medicago truncatula
Medtr5g023660 0.5kb downstream 0.5kb downstream 6662 true chr5: 9388543-9395204 Medicago truncatula
Medtr5g023660 0.5kb downstream 0.5kb downstream 500 false chr5: 9388543-9389042 Medicago truncatula
Medtr5g023660 1.0kb upstream 1.0kb upstream 7162 true chr5: 9389043-9396204 Medicago truncatula
Medtr5g023660 1.0kb upstream 1.0kb upstream 1000 false chr5: 9395205-9396204 Medicago truncatula
Medtr5g023660 1.0kb downstream 1.0kb downstream 7162 true chr5: 9388043-9395204 Medicago truncatula
Medtr5g023660 1.0kb downstream 1.0kb downstream 1000 false chr5: 9388043-9389042 Medicago truncatula
Medtr5g023660 2.0kb upstream 2.0kb upstream 8162 true chr5: 9389043-9397204 Medicago truncatula
Medtr5g023660 2.0kb upstream 2.0kb upstream 2000 false chr5: 9395205-9397204 Medicago truncatula
Medtr5g023660 2.0kb downstream 2.0kb downstream 8162 true chr5: 9387043-9395204 Medicago truncatula
Medtr5g023660 2.0kb downstream 2.0kb downstream 2000 false chr5: 9387043-9389042 Medicago truncatula
Medtr5g023660 5.0kb upstream 5.0kb upstream 11162 true chr5: 9389043-9400204 Medicago truncatula
Medtr5g023660 5.0kb upstream 5.0kb upstream 5000 false chr5: 9395205-9400204 Medicago truncatula
Medtr5g023660 5.0kb downstream 5.0kb downstream 11162 true chr5: 9384043-9395204 Medicago truncatula
Medtr5g023660 5.0kb downstream 5.0kb downstream 5000 false chr5: 9384043-9389042 Medicago truncatula
Medtr5g023660 10.0kb upstream 10.0kb upstream 16162 true chr5: 9389043-9405204 Medicago truncatula
Medtr5g023660 10.0kb upstream 10.0kb upstream 10000 false chr5: 9395205-9405204 Medicago truncatula
Medtr5g023660 10.0kb downstream 10.0kb downstream 16162 true chr5: 9379043-9395204 Medicago truncatula
Medtr5g023660 10.0kb downstream 10.0kb downstream 10000 false chr5: 9379043-9389042 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297560 5265 Fabidae View MSA
124071027 5270 Rosid View MSA
123743070 5271 Pentapetalae View MSA
122794759 5272 Eudicot View MSA
122046536 5273 Angiosperm View MSA
121345495 5274 Embryophyte View MSA
123428443 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.349        
cufflinks 0.045     Low  
cufflinks 0.045     Low  
cufflinks 0.14        
cufflinks 0.043     Low  
cufflinks 0.096     Low  
cufflinks 0.53       High
cufflinks 0.057     Low  
cufflinks 0.595       High

0 Strain