Gene : Medtr5g017500 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31307:SF17 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K7P8 Description:  Myb/SANT-like DNA-binding domain protein
Genomic Order:  937 Name:  ? Medtr5g017500
Secondary Identifier:  ? PAC:31090986
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g017500 0.5kb upstream 0.5kb upstream 1811 true chr5: 6396765-6398575 Medicago truncatula
Medtr5g017500 0.5kb upstream 0.5kb upstream 500 false chr5: 6396765-6397264 Medicago truncatula
Medtr5g017500 0.5kb downstream 0.5kb downstream 1811 true chr5: 6397265-6399075 Medicago truncatula
Medtr5g017500 0.5kb downstream 0.5kb downstream 500 false chr5: 6398576-6399075 Medicago truncatula
Medtr5g017500 1.0kb upstream 1.0kb upstream 2311 true chr5: 6396265-6398575 Medicago truncatula
Medtr5g017500 1.0kb upstream 1.0kb upstream 1000 false chr5: 6396265-6397264 Medicago truncatula
Medtr5g017500 1.0kb downstream 1.0kb downstream 2311 true chr5: 6397265-6399575 Medicago truncatula
Medtr5g017500 1.0kb downstream 1.0kb downstream 1000 false chr5: 6398576-6399575 Medicago truncatula
Medtr5g017500 2.0kb upstream 2.0kb upstream 3311 true chr5: 6395265-6398575 Medicago truncatula
Medtr5g017500 2.0kb upstream 2.0kb upstream 2000 false chr5: 6395265-6397264 Medicago truncatula
Medtr5g017500 2.0kb downstream 2.0kb downstream 3311 true chr5: 6397265-6400575 Medicago truncatula
Medtr5g017500 2.0kb downstream 2.0kb downstream 2000 false chr5: 6398576-6400575 Medicago truncatula
Medtr5g017500 5.0kb upstream 5.0kb upstream 6311 true chr5: 6392265-6398575 Medicago truncatula
Medtr5g017500 5.0kb upstream 5.0kb upstream 5000 false chr5: 6392265-6397264 Medicago truncatula
Medtr5g017500 5.0kb downstream 5.0kb downstream 6311 true chr5: 6397265-6403575 Medicago truncatula
Medtr5g017500 5.0kb downstream 5.0kb downstream 5000 false chr5: 6398576-6403575 Medicago truncatula
Medtr5g017500 10.0kb upstream 10.0kb upstream 11311 true chr5: 6387265-6398575 Medicago truncatula
Medtr5g017500 10.0kb upstream 10.0kb upstream 10000 false chr5: 6387265-6397264 Medicago truncatula
Medtr5g017500 10.0kb downstream 10.0kb downstream 11311 true chr5: 6397265-6408575 Medicago truncatula
Medtr5g017500 10.0kb downstream 10.0kb downstream 10000 false chr5: 6398576-6408575 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302150 5265 Fabidae View MSA
124068067 5270 Rosid View MSA
123747324 5271 Pentapetalae View MSA
122790376 5272 Eudicot View MSA
122048588 5273 Angiosperm View MSA
121351505 5274 Embryophyte View MSA
123382195 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.258       Low
cufflinks 4.112        
cufflinks 3.764        
cufflinks 10.337     High High
cufflinks 4.381        
cufflinks 5.448        
cufflinks 3.262        
cufflinks 3.806        
cufflinks 6.082        

0 Strain