Gene : Medtr5g017470 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10015:SF166 - HEAT STRESS TRANSCRIPTION FACTOR B-1 Description:  heat shock transcription factor
Genomic Order:  933 Name:  ? Medtr5g017470
Secondary Identifier:  ? PAC:31087038
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g017470 0.5kb upstream 0.5kb upstream 3211 true chr5: 6384624-6387834 Medicago truncatula
Medtr5g017470 0.5kb upstream 0.5kb upstream 500 false chr5: 6384624-6385123 Medicago truncatula
Medtr5g017470 0.5kb downstream 0.5kb downstream 3211 true chr5: 6385124-6388334 Medicago truncatula
Medtr5g017470 0.5kb downstream 0.5kb downstream 500 false chr5: 6387835-6388334 Medicago truncatula
Medtr5g017470 1.0kb upstream 1.0kb upstream 3711 true chr5: 6384124-6387834 Medicago truncatula
Medtr5g017470 1.0kb upstream 1.0kb upstream 1000 false chr5: 6384124-6385123 Medicago truncatula
Medtr5g017470 1.0kb downstream 1.0kb downstream 3711 true chr5: 6385124-6388834 Medicago truncatula
Medtr5g017470 1.0kb downstream 1.0kb downstream 1000 false chr5: 6387835-6388834 Medicago truncatula
Medtr5g017470 2.0kb upstream 2.0kb upstream 4711 true chr5: 6383124-6387834 Medicago truncatula
Medtr5g017470 2.0kb upstream 2.0kb upstream 2000 false chr5: 6383124-6385123 Medicago truncatula
Medtr5g017470 2.0kb downstream 2.0kb downstream 4711 true chr5: 6385124-6389834 Medicago truncatula
Medtr5g017470 2.0kb downstream 2.0kb downstream 2000 false chr5: 6387835-6389834 Medicago truncatula
Medtr5g017470 5.0kb upstream 5.0kb upstream 7711 true chr5: 6380124-6387834 Medicago truncatula
Medtr5g017470 5.0kb upstream 5.0kb upstream 5000 false chr5: 6380124-6385123 Medicago truncatula
Medtr5g017470 5.0kb downstream 5.0kb downstream 7711 true chr5: 6385124-6392834 Medicago truncatula
Medtr5g017470 5.0kb downstream 5.0kb downstream 5000 false chr5: 6387835-6392834 Medicago truncatula
Medtr5g017470 10.0kb upstream 10.0kb upstream 12711 true chr5: 6375124-6387834 Medicago truncatula
Medtr5g017470 10.0kb upstream 10.0kb upstream 10000 false chr5: 6375124-6385123 Medicago truncatula
Medtr5g017470 10.0kb downstream 10.0kb downstream 12711 true chr5: 6385124-6397834 Medicago truncatula
Medtr5g017470 10.0kb downstream 10.0kb downstream 10000 false chr5: 6387835-6397834 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309469 5265 Fabidae View MSA
124060729 5270 Rosid View MSA
123741072 5271 Pentapetalae View MSA
122797389 5272 Eudicot View MSA
122047819 5273 Angiosperm View MSA
121349623 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.153     High  
cufflinks 10.007     High  
cufflinks 9.728        
cufflinks 29.907     High  
cufflinks 11.167     High  
cufflinks 40.906     High  
cufflinks 98.232     High High
cufflinks 6.263       Low
cufflinks 116.499     High High

0 Strain