Gene : Medtr5g017550 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR10891//PTHR10891:SF533 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN Description:  EF hand calcium-binding family protein
Genomic Order:  941 Name:  ? Medtr5g017550
Secondary Identifier:  ? PAC:31088709
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g017550 0.5kb upstream 0.5kb upstream 1274 true chr5: 6409217-6410490 Medicago truncatula
Medtr5g017550 0.5kb upstream 0.5kb upstream 500 false chr5: 6409217-6409716 Medicago truncatula
Medtr5g017550 0.5kb downstream 0.5kb downstream 1274 true chr5: 6409717-6410990 Medicago truncatula
Medtr5g017550 0.5kb downstream 0.5kb downstream 500 false chr5: 6410491-6410990 Medicago truncatula
Medtr5g017550 1.0kb upstream 1.0kb upstream 1774 true chr5: 6408717-6410490 Medicago truncatula
Medtr5g017550 1.0kb upstream 1.0kb upstream 1000 false chr5: 6408717-6409716 Medicago truncatula
Medtr5g017550 1.0kb downstream 1.0kb downstream 1774 true chr5: 6409717-6411490 Medicago truncatula
Medtr5g017550 1.0kb downstream 1.0kb downstream 1000 false chr5: 6410491-6411490 Medicago truncatula
Medtr5g017550 2.0kb upstream 2.0kb upstream 2774 true chr5: 6407717-6410490 Medicago truncatula
Medtr5g017550 2.0kb upstream 2.0kb upstream 2000 false chr5: 6407717-6409716 Medicago truncatula
Medtr5g017550 2.0kb downstream 2.0kb downstream 2774 true chr5: 6409717-6412490 Medicago truncatula
Medtr5g017550 2.0kb downstream 2.0kb downstream 2000 false chr5: 6410491-6412490 Medicago truncatula
Medtr5g017550 5.0kb upstream 5.0kb upstream 5774 true chr5: 6404717-6410490 Medicago truncatula
Medtr5g017550 5.0kb upstream 5.0kb upstream 5000 false chr5: 6404717-6409716 Medicago truncatula
Medtr5g017550 5.0kb downstream 5.0kb downstream 5774 true chr5: 6409717-6415490 Medicago truncatula
Medtr5g017550 5.0kb downstream 5.0kb downstream 5000 false chr5: 6410491-6415490 Medicago truncatula
Medtr5g017550 10.0kb upstream 10.0kb upstream 10774 true chr5: 6399717-6410490 Medicago truncatula
Medtr5g017550 10.0kb upstream 10.0kb upstream 10000 false chr5: 6399717-6409716 Medicago truncatula
Medtr5g017550 10.0kb downstream 10.0kb downstream 10774 true chr5: 6409717-6420490 Medicago truncatula
Medtr5g017550 10.0kb downstream 10.0kb downstream 10000 false chr5: 6410491-6420490 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307758 5265 Fabidae View MSA
124064178 5270 Rosid View MSA
123753496 5271 Pentapetalae View MSA
122789442 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.686       Low
cufflinks 18.027     High  
cufflinks 15.834     High  
cufflinks 3.813        
cufflinks 16.171     High  
cufflinks 3.494        
cufflinks 7.747        
cufflinks 12.844     High  
cufflinks 3.367        

0 Strain