Gene : Medtr5g017560 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR10891//PTHR10891:SF533 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN Description:  EF hand calcium-binding family protein
Genomic Order:  942 Name:  ? Medtr5g017560
Secondary Identifier:  ? PAC:31089960
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g017560 0.5kb upstream 0.5kb upstream 1070 true chr5: 6412026-6413095 Medicago truncatula
Medtr5g017560 0.5kb upstream 0.5kb upstream 500 false chr5: 6412026-6412525 Medicago truncatula
Medtr5g017560 0.5kb downstream 0.5kb downstream 1070 true chr5: 6412526-6413595 Medicago truncatula
Medtr5g017560 0.5kb downstream 0.5kb downstream 500 false chr5: 6413096-6413595 Medicago truncatula
Medtr5g017560 1.0kb upstream 1.0kb upstream 1570 true chr5: 6411526-6413095 Medicago truncatula
Medtr5g017560 1.0kb upstream 1.0kb upstream 1000 false chr5: 6411526-6412525 Medicago truncatula
Medtr5g017560 1.0kb downstream 1.0kb downstream 1570 true chr5: 6412526-6414095 Medicago truncatula
Medtr5g017560 1.0kb downstream 1.0kb downstream 1000 false chr5: 6413096-6414095 Medicago truncatula
Medtr5g017560 2.0kb upstream 2.0kb upstream 2570 true chr5: 6410526-6413095 Medicago truncatula
Medtr5g017560 2.0kb upstream 2.0kb upstream 2000 false chr5: 6410526-6412525 Medicago truncatula
Medtr5g017560 2.0kb downstream 2.0kb downstream 2570 true chr5: 6412526-6415095 Medicago truncatula
Medtr5g017560 2.0kb downstream 2.0kb downstream 2000 false chr5: 6413096-6415095 Medicago truncatula
Medtr5g017560 5.0kb upstream 5.0kb upstream 5570 true chr5: 6407526-6413095 Medicago truncatula
Medtr5g017560 5.0kb upstream 5.0kb upstream 5000 false chr5: 6407526-6412525 Medicago truncatula
Medtr5g017560 5.0kb downstream 5.0kb downstream 5570 true chr5: 6412526-6418095 Medicago truncatula
Medtr5g017560 5.0kb downstream 5.0kb downstream 5000 false chr5: 6413096-6418095 Medicago truncatula
Medtr5g017560 10.0kb upstream 10.0kb upstream 10570 true chr5: 6402526-6413095 Medicago truncatula
Medtr5g017560 10.0kb upstream 10.0kb upstream 10000 false chr5: 6402526-6412525 Medicago truncatula
Medtr5g017560 10.0kb downstream 10.0kb downstream 10570 true chr5: 6412526-6423095 Medicago truncatula
Medtr5g017560 10.0kb downstream 10.0kb downstream 10000 false chr5: 6413096-6423095 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307758 5265 Fabidae View MSA
124064178 5270 Rosid View MSA
123753496 5271 Pentapetalae View MSA
122789442 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.135       Low
cufflinks 0.858        
cufflinks 0.643        
cufflinks 0.164       Low
cufflinks 0.705        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.491        
cufflinks 0.984       High
cufflinks 0.286        

0 Strain