Gene : Medtr5g017350 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF00498//PF01494 - FHA domain (FHA) // FAD binding domain (FAD_binding_3) Description:  zeaxanthin epoxidase
Genomic Order:  925 Name:  ? Medtr5g017350
Secondary Identifier:  ? PAC:31089143
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g017350 0.5kb upstream 0.5kb upstream 10108 true chr5: 6313011-6323118 Medicago truncatula
Medtr5g017350 0.5kb upstream 0.5kb upstream 500 false chr5: 6313011-6313510 Medicago truncatula
Medtr5g017350 0.5kb downstream 0.5kb downstream 10108 true chr5: 6313511-6323618 Medicago truncatula
Medtr5g017350 0.5kb downstream 0.5kb downstream 500 false chr5: 6323119-6323618 Medicago truncatula
Medtr5g017350 1.0kb upstream 1.0kb upstream 10608 true chr5: 6312511-6323118 Medicago truncatula
Medtr5g017350 1.0kb upstream 1.0kb upstream 1000 false chr5: 6312511-6313510 Medicago truncatula
Medtr5g017350 1.0kb downstream 1.0kb downstream 10608 true chr5: 6313511-6324118 Medicago truncatula
Medtr5g017350 1.0kb downstream 1.0kb downstream 1000 false chr5: 6323119-6324118 Medicago truncatula
Medtr5g017350 2.0kb upstream 2.0kb upstream 11608 true chr5: 6311511-6323118 Medicago truncatula
Medtr5g017350 2.0kb upstream 2.0kb upstream 2000 false chr5: 6311511-6313510 Medicago truncatula
Medtr5g017350 2.0kb downstream 2.0kb downstream 11608 true chr5: 6313511-6325118 Medicago truncatula
Medtr5g017350 2.0kb downstream 2.0kb downstream 2000 false chr5: 6323119-6325118 Medicago truncatula
Medtr5g017350 5.0kb upstream 5.0kb upstream 14608 true chr5: 6308511-6323118 Medicago truncatula
Medtr5g017350 5.0kb upstream 5.0kb upstream 5000 false chr5: 6308511-6313510 Medicago truncatula
Medtr5g017350 5.0kb downstream 5.0kb downstream 14608 true chr5: 6313511-6328118 Medicago truncatula
Medtr5g017350 5.0kb downstream 5.0kb downstream 5000 false chr5: 6323119-6328118 Medicago truncatula
Medtr5g017350 10.0kb upstream 10.0kb upstream 19608 true chr5: 6303511-6323118 Medicago truncatula
Medtr5g017350 10.0kb upstream 10.0kb upstream 10000 false chr5: 6303511-6313510 Medicago truncatula
Medtr5g017350 10.0kb downstream 10.0kb downstream 19608 true chr5: 6313511-6333118 Medicago truncatula
Medtr5g017350 10.0kb downstream 10.0kb downstream 10000 false chr5: 6323119-6333118 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311444 5265 Fabidae View MSA
124062370 5270 Rosid View MSA
123738980 5271 Pentapetalae View MSA
122793592 5272 Eudicot View MSA
122051676 5273 Angiosperm View MSA
123429089 5275 Viridiplantae View MSA
121349162 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.101        
cufflinks 0.201        
cufflinks 0.082       Low
cufflinks 0.086        
cufflinks 0.181        
cufflinks 0.104     Low  
cufflinks 0.259       High
cufflinks 0.114        
cufflinks 0.365       High

0 Strain