Gene : Medtr5g023960 M. truncatula Mt4.0v1
Defline:  (1 of 2) 3.1.3.66 - Phosphatidylinositol-3,4-bisphosphate 4-phosphatase / Phosphoinositide 4-phosphatase Description:  phosphoinositide phosphatase SAC1
Genomic Order:  1385 Name:  ? Medtr5g023960
Secondary Identifier:  ? PAC:31089533
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6368 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g023960 0.5kb upstream 0.5kb upstream 11637 true chr5: 9559816-9571452 Medicago truncatula
Medtr5g023960 0.5kb upstream 0.5kb upstream 500 false chr5: 9559816-9560315 Medicago truncatula
Medtr5g023960 0.5kb downstream 0.5kb downstream 11637 true chr5: 9560316-9571952 Medicago truncatula
Medtr5g023960 0.5kb downstream 0.5kb downstream 500 false chr5: 9571453-9571952 Medicago truncatula
Medtr5g023960 1.0kb upstream 1.0kb upstream 12137 true chr5: 9559316-9571452 Medicago truncatula
Medtr5g023960 1.0kb upstream 1.0kb upstream 1000 false chr5: 9559316-9560315 Medicago truncatula
Medtr5g023960 1.0kb downstream 1.0kb downstream 12137 true chr5: 9560316-9572452 Medicago truncatula
Medtr5g023960 1.0kb downstream 1.0kb downstream 1000 false chr5: 9571453-9572452 Medicago truncatula
Medtr5g023960 2.0kb upstream 2.0kb upstream 13137 true chr5: 9558316-9571452 Medicago truncatula
Medtr5g023960 2.0kb upstream 2.0kb upstream 2000 false chr5: 9558316-9560315 Medicago truncatula
Medtr5g023960 2.0kb downstream 2.0kb downstream 13137 true chr5: 9560316-9573452 Medicago truncatula
Medtr5g023960 2.0kb downstream 2.0kb downstream 2000 false chr5: 9571453-9573452 Medicago truncatula
Medtr5g023960 5.0kb upstream 5.0kb upstream 16137 true chr5: 9555316-9571452 Medicago truncatula
Medtr5g023960 5.0kb upstream 5.0kb upstream 5000 false chr5: 9555316-9560315 Medicago truncatula
Medtr5g023960 5.0kb downstream 5.0kb downstream 16137 true chr5: 9560316-9576452 Medicago truncatula
Medtr5g023960 5.0kb downstream 5.0kb downstream 5000 false chr5: 9571453-9576452 Medicago truncatula
Medtr5g023960 10.0kb upstream 10.0kb upstream 21137 true chr5: 9550316-9571452 Medicago truncatula
Medtr5g023960 10.0kb upstream 10.0kb upstream 10000 false chr5: 9550316-9560315 Medicago truncatula
Medtr5g023960 10.0kb downstream 10.0kb downstream 21137 true chr5: 9560316-9581452 Medicago truncatula
Medtr5g023960 10.0kb downstream 10.0kb downstream 10000 false chr5: 9571453-9581452 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307611 5265 Fabidae View MSA
124069154 5270 Rosid View MSA
123751013 5271 Pentapetalae View MSA
122793710 5272 Eudicot View MSA
122044264 5273 Angiosperm View MSA
121351625 5274 Embryophyte View MSA
123428410 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.616       High
cufflinks 1.671        
cufflinks 1.162        
cufflinks 0.702       Low
cufflinks 1.576        
cufflinks 0.489       Low
cufflinks 1.513        
cufflinks 1.104        
cufflinks 1.643        

0 Strain